Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Desulfovibrionia
Order
Desulfovibrionales
Family
Desulfovibrionaceae
Genus
Halodesulfovibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Desulfovibrionia |
| Order | Desulfovibrionales |
| Family | Desulfovibrionaceae |
| Genus | Halodesulfovibrio |
| Species | Halodesulfovibrio marinisediminis |
| Strain | DSM 17456 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | curved/spiral |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
996652 bp
Thymine Count
1045497 bp
Guanine Count
870341 bp
Cytosine Count
797493 bp
Genome Length
3710653 bp
Protein-coding Genes
3104 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptide/nickel transport system substrate-binding protein | SAMN02745161_1755 | Not Available | Negative | 1927895 - 1929466 | 57430.1 |
| glutamate carboxypeptidase | SAMN02745161_1756 | Not Available | Positive | 1929666 - 1930829 | 41740.8 |
| putative lumazine-binding | SAMN02745161_1757 | Not Available | Negative | 1930977 - 1931354 | 14338.2 |
| thioredoxin reductase | SAMN02745161_1758 | Not Available | Negative | 1932224 - 1933606 | 49650.5 |
| 2fe-2s iron-sulfur cluster binding domain-containing protein | SAMN02745161_1759 | Not Available | Negative | 1933606 - 1933899 | 10427.6 |
| glycine/d-amino acid oxidase | SAMN02745161_1760 | Not Available | Negative | 1933931 - 1935046 | 40379.5 |
| reactive intermediate/imine deaminase | SAMN02745161_1761 | Not Available | Negative | 1935206 - 1935580 | 13770.3 |
| solute:na+ symporter, sss family | SAMN02745161_1762 | Not Available | Negative | 1936003 - 1937451 | 51436.1 |
| transcriptional regulator containing pas, aaa-type atpase, and dna-binding fis domains | SAMN02745161_1763 | Not Available | Negative | 1937777 - 1939834 | 75475.0 |
| formate c-acetyltransferase | SAMN02745161_1764 | Not Available | Negative | 1940010 - 1942490 | 93574.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

