Kingdom
Pseudomonadati
Phylum
Thermodesulfobacteriota
Class
Desulfovibrionia
Order
Desulfovibrionales
Family
Desulfovibrionaceae
Genus
Halodesulfovibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Thermodesulfobacteriota |
| Class | Desulfovibrionia |
| Order | Desulfovibrionales |
| Family | Desulfovibrionaceae |
| Genus | Halodesulfovibrio |
| Species | Halodesulfovibrio marinisediminis |
| Strain | DSM 17456 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | curved/spiral |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
996652 bp
Thymine Count
1045497 bp
Guanine Count
870341 bp
Cytosine Count
797493 bp
Genome Length
3710653 bp
Protein-coding Genes
3104 genes
Non-Coding Genes
155 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dihydroxyacetone kinase dhal subunit | SAMN02745161_1533 | Not Available | Positive | 1658640 - 1659269 | 22501.2 |
| phosphocarrier protein fpr | SAMN02745161_1534 | Not Available | Positive | 1659274 - 1661757 | 89437.7 |
| arginine:ornithine antiporter / lysine permease | SAMN02745161_1535 | Not Available | Positive | 1662253 - 1663680 | 50916.1 |
| arginine decarboxylase | SAMN02745161_1536 | Not Available | Positive | 1663710 - 1666034 | 88224.1 |
| acyl-coa synthetase (ndp forming) | SAMN02745161_1537 | Not Available | Negative | 1666233 - 1668635 | 87554.8 |
| protein tyrosine phosphatase | SAMN02745161_1538 | Not Available | Negative | 1669110 - 1669556 | 16169.1 |
| transcriptional regulator, arsr family | SAMN02745161_1539 | Not Available | Negative | 1669565 - 1669939 | 14263.3 |
| hypothetical protein | SAMN02745161_1540 | Not Available | Negative | 1670229 - 1670351 | 4508.7 |
| uncharacterized membrane-anchored protein yitt, contains duf161 and duf2179 domains | SAMN02745161_1541 | Not Available | Negative | 1670528 - 1671391 | 32330.1 |
| flp pilus assembly protein, atpase cpae | SAMN02745161_1542 | Not Available | Negative | 1672200 - 1673330 | 40990.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

