Halodesulfovibrio marinisediminis DSM 17456

curved/spiral

Kingdom

Pseudomonadati

Phylum

Thermodesulfobacteriota

Class

Desulfovibrionia

Order

Desulfovibrionales

Family

Desulfovibrionaceae

Genus

Halodesulfovibrio

Description

Halodesulfovibrio marinisediminis DSM 17456 is a mesophilic, curved to spiral-shaped bacterium known for its unique ecological niche. It thrives optimally at a temperature of 37°C, indicating a preference for moderate environmental conditions. This organism is characterized by the presence of flagella, which facilitate motility, allowing it to navigate its aquatic habitat effectively. H. marinisediminis is a non-spore-forming bacterium, which suggests that it relies on other survival strategies rather than sporulation to withstand environmental stresses. This trait can impact its ecological role, as non-spore-forming bacteria often have different survival and growth strategies compared to their spore-forming counterparts. The genome of H. marinisediminis is represented by a single replicon, which is an important aspect of its genetic organization. The reference accession number for its genetic material is FSRG00000000.1, providing a resource for further genomic studies and understanding its metabolic pathways. In summary, Halodesulfovibrio marinisediminis DSM 17456 is a mesophilic, motile bacterium that plays a role in aquatic environments. Its non-spore-forming nature and optimal growth conditions suggest it may be involved in specific biogeochemical processes, potentially influencing nutrient cycling in marine ecosystems. The understanding of such traits is crucial for appreciating the ecological dynamics in which this bacterium participates.

Taxonomy

KingdomPseudomonadati
PhylumThermodesulfobacteriota
ClassDesulfovibrionia
OrderDesulfovibrionales
FamilyDesulfovibrionaceae
GenusHalodesulfovibrio
SpeciesHalodesulfovibrio marinisediminis
StrainDSM 17456

Profile

Physiology
Gram staining propertiesNot Available
Shapecurved/spiral
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperature37
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Desulfovibrio marinisediminis DSM 17456 genome assembly, contig:

Gene Summary

Adenine Count

996652 bp

Thymine Count

1045497 bp

Guanine Count

870341 bp

Cytosine Count

797493 bp

Genome Length

3710653 bp

Protein-coding Genes

3104 genes

Non-Coding Genes

155 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
bacterial peptide chain release factor 3 (brf-3)SAMN02745161_1154Not AvailablePositive1224940 - 122652659632.2
transcriptional regulator, mucr familySAMN02745161_1155Not AvailableNegative1226649 - 122704115317.0
n-methylhydantoinase a/oxoprolinase/acetone carboxylase, beta subunitSAMN02745161_1156Not AvailablePositive1227653 - 122929957969.2
hypothetical proteinSAMN02745161_1157Not AvailablePositive1229337 - 122966913006.0
zinc dependent phospholipase cSAMN02745161_1158Not AvailableNegative1230025 - 123091531904.8
oxygen-independent coproporphyrinogen-3 oxidaseSAMN02745161_1159Not AvailableNegative1231003 - 123214542775.4
dna-binding transcriptional regulator, marr familySAMN02745161_1160Not AvailablePositive1232313 - 123275316506.3
major facilitator superfamily proteinSAMN02745161_1161Not AvailablePositive1232800 - 123422150078.5
murein dd-endopeptidase mepm and murein hydrolase activator nlpd, contain lysm domainSAMN02745161_1162Not AvailablePositive1234847 - 123618749588.4
hypothetical proteinSAMN02745161_1163Not AvailableNegative1236555 - 123688412025.6

Displaying genes 1171 – 1180 of 3259 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.