Desulfovibrio litoralis DSM 11393

Gram-negativeanaerobic

Kingdom

Pseudomonadati

Phylum

Thermodesulfobacteriota

Class

Desulfovibrionia

Order

Desulfovibrionales

Family

Desulfovibrionaceae

Genus

Desulfovibrio

Description

Desulfovibrio litoralis DSM 11393 is a Gram-negative bacterium characterized by its anaerobic metabolism. This species is notable for its ability to thrive in environments devoid of oxygen, which is a defining trait of anaerobic organisms. D. litoralis possesses flagella, enabling motility, which may play a role in its ecological interactions and colonization of specific niches. The organism has a single replicon, indicating a streamlined genomic organization that may contribute to its efficient metabolic processes. The genomic data is cataloged under the accession number FRDI00000000.1, which provides a reference for further studies and exploration of its genetic makeup. In the context of biological and ecological significance, Desulfovibrio litoralis is part of a group of sulfate-reducing bacteria (SRB), which are crucial in biogeochemical cycles, particularly in the reduction of sulfates to sulfides. This process plays a vital role in the sulfur cycle, impacting nutrient availability and energy flow in various ecosystems, especially in marine and sedimentary environments where sulfate is abundant. The ecological role of SRBs, including D. litoralis, underscores their importance in maintaining the balance of microbial communities and influencing biogeochemical transformations in anaerobic habitats.

Taxonomy

KingdomPseudomonadati
PhylumThermodesulfobacteriota
ClassDesulfovibrionia
OrderDesulfovibrionales
FamilyDesulfovibrionaceae
GenusDesulfovibrio
SpeciesDesulfovibrio litoralis
StrainDSM 11393

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsanaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Desulfovibrio litoralis DSM 11393 genome assembly, contig:

Gene Summary

Adenine Count

860074 bp

Thymine Count

866482 bp

Guanine Count

508209 bp

Cytosine Count

502613 bp

Genome Length

2741424 bp

Protein-coding Genes

2335 genes

Non-Coding Genes

74 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
2-oxoglutarate ferredoxin oxidoreductase subunit betaSAMN02745728_00867Not AvailablePositive948535 - 94938630858.9
2-oxoglutarate ferredoxin oxidoreductase, gamma subunitSAMN02745728_00868Not AvailablePositive949386 - 94993419848.5
pyruvate ferredoxin/flavodoxin oxidoreductaseSAMN02745728_00869Not AvailablePositive950070 - 95034210218.7
lipopolysaccharide export system protein lptaSAMN02745728_00870Not AvailableNegative950575 - 95114420674.1
hypothetical proteinSAMN02745728_00871Not AvailableNegative951157 - 95220338071.4
3-deoxy-d-manno-octulosonate 8-phosphate phosphatase (kdo 8-p phosphatase)SAMN02745728_00872Not AvailableNegative952200 - 95278121687.9
2-dehydro-3-deoxyphosphooctonate aldolase (kdo 8-p synthase)SAMN02745728_00873Not AvailableNegative952778 - 95359629887.9
hydrogenase maturation protein hypfSAMN02745728_00874Not AvailablePositive953820 - 95633994914.5
pilz domain-containing proteinSAMN02745728_00875Not AvailablePositive956600 - 95704016287.4
Trna-serNot AvailableNot AvailablePositive957135 - 957224Not Available

Displaying genes 911 – 920 of 2409 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.