Desulfovibrio litoralis DSM 11393

Gram-negativeanaerobic

Kingdom

Pseudomonadati

Phylum

Thermodesulfobacteriota

Class

Desulfovibrionia

Order

Desulfovibrionales

Family

Desulfovibrionaceae

Genus

Desulfovibrio

Description

Desulfovibrio litoralis DSM 11393 is a Gram-negative bacterium characterized by its anaerobic metabolism. This species is notable for its ability to thrive in environments devoid of oxygen, which is a defining trait of anaerobic organisms. D. litoralis possesses flagella, enabling motility, which may play a role in its ecological interactions and colonization of specific niches. The organism has a single replicon, indicating a streamlined genomic organization that may contribute to its efficient metabolic processes. The genomic data is cataloged under the accession number FRDI00000000.1, which provides a reference for further studies and exploration of its genetic makeup. In the context of biological and ecological significance, Desulfovibrio litoralis is part of a group of sulfate-reducing bacteria (SRB), which are crucial in biogeochemical cycles, particularly in the reduction of sulfates to sulfides. This process plays a vital role in the sulfur cycle, impacting nutrient availability and energy flow in various ecosystems, especially in marine and sedimentary environments where sulfate is abundant. The ecological role of SRBs, including D. litoralis, underscores their importance in maintaining the balance of microbial communities and influencing biogeochemical transformations in anaerobic habitats.

Taxonomy

KingdomPseudomonadati
PhylumThermodesulfobacteriota
ClassDesulfovibrionia
OrderDesulfovibrionales
FamilyDesulfovibrionaceae
GenusDesulfovibrio
SpeciesDesulfovibrio litoralis
StrainDSM 11393

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsanaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Desulfovibrio litoralis DSM 11393 genome assembly, contig:

Gene Summary

Adenine Count

860074 bp

Thymine Count

866482 bp

Guanine Count

508209 bp

Cytosine Count

502613 bp

Genome Length

2741424 bp

Protein-coding Genes

2335 genes

Non-Coding Genes

74 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
radical sam-linked protein/radical sam family uncharacterized proteinSAMN02745728_02139Not AvailablePositive2435341 - 2438058103028.0
antitoxin component ywqk of the ywqjk toxin-antitoxin moduleSAMN02745728_02140Not AvailableNegative2438190 - 243902931119.1
antitoxin component ywqk of the ywqjk toxin-antitoxin moduleSAMN02745728_02141Not AvailableNegative2439047 - 244041152282.7
hypothetical proteinSAMN02745728_02142Not AvailablePositive2440637 - 244160837712.3
acetyl-coa carboxylase carboxyl transferase subunit betaSAMN02745728_02143Not AvailableNegative2441733 - 244400386139.2
biotin carboxylase c-terminal domain-containing proteinSAMN02745728_02144Not AvailableNegative2444116 - 244554953757.0
purine-nucleoside phosphorylaseSAMN02745728_02145Not AvailablePositive2445996 - 244682330367.9
glycine cleavage system h proteinSAMN02745728_02146Not AvailablePositive2446893 - 244726713406.6
glycine dehydrogenase (decarboxylating) alpha subunitSAMN02745728_02147Not AvailablePositive2447332 - 244866649073.5
glycine dehydrogenase (decarboxylating) beta subunitSAMN02745728_02148Not AvailablePositive2448793 - 245023252860.2

Displaying genes 2141 – 2150 of 2409 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.