Desulfocicer vacuolatum DSM 3385

Kingdom

Pseudomonadati

Phylum

Thermodesulfobacteriota

Class

Desulfobacteria

Order

Desulfobacterales

Family

Desulfobacteraceae

Genus

Desulfocicer

Description

Desulfocicer vacuolatum DSM 3385 is a sulfate-reducing bacterium characterized by a single replicon. This organism is notable for its metabolic capabilities, particularly in environments where sulfate serves as an electron acceptor, which is a critical process in biogeochemical cycles, especially in anaerobic conditions. The strain is cataloged under the accession FWXY00000000.1, indicating its genomic data is available for further research and analysis. This genetic information can provide insights into its metabolic pathways and functional characteristics, which are essential for understanding its role in sulfur cycling. The ecological significance of Desulfocicer vacuolatum lies in its contribution to the degradation of organic matter in sulfate-rich environments, such as marine sediments and other anaerobic habitats. By reducing sulfate to sulfide, it plays a pivotal role in nutrient cycling, impacting the overall health and dynamics of microbial communities. In summary, Desulfocicer vacuolatum DSM 3385, with its single replicon and documented genomic sequence, represents an important player in sulfate reduction processes. Its metabolic activities contribute to the ecological balance in anaerobic environments, highlighting the interconnection between microbial life and biogeochemical cycles.

Taxonomy

KingdomPseudomonadati
PhylumThermodesulfobacteriota
ClassDesulfobacteria
OrderDesulfobacterales
FamilyDesulfobacteraceae
GenusDesulfocicer
SpeciesDesulfocicer vacuolatum
StrainDSM 3385

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Desulfobacterium vacuolatum DSM 3385 genome assembly, contig:

Gene Summary

Adenine Count

1351755 bp

Thymine Count

1340293 bp

Guanine Count

1157870 bp

Cytosine Count

1185435 bp

Genome Length

5035799 bp

Protein-coding Genes

4101 genes

Non-Coding Genes

63 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
proline racemaseSAMN02746065_1246Not AvailablePositive4190912 - 419195537830.7
hypothetical proteinSAMN02746065_1247Not AvailablePositive4191955 - 419356258103.2
pas domain s-box-containing proteinSAMN02746065_1248Not AvailablePositive4193555 - 419495552014.4
spermidine/putrescine transport system permease proteinSAMN02746065_1249Not AvailablePositive4195632 - 419649832451.1
spermidine/putrescine transport system permease proteinSAMN02746065_12410Not AvailablePositive4196792 - 419758929349.9
spermidine/putrescine transport system substrate-binding proteinSAMN02746065_12411Not AvailablePositive4197745 - 419890542371.5
putative spermidine/putrescine transport system atp-binding protein/spermidine/putrescine transport system atp-binding proteinSAMN02746065_12412Not AvailablePositive4198975 - 420007240986.4
hypothetical proteinSAMN02746065_12413Not AvailablePositive4200182 - 420054414051.8
l-lysine 2,3-aminomutase (ef-p beta-lysylation pathway)SAMN02746065_12414Not AvailablePositive4200541 - 420300992227.0
peptidase family m23SAMN02746065_12415Not AvailablePositive4203022 - 420368424929.3

Displaying genes 3451 – 3460 of 4164 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.