Desulfocicer vacuolatum DSM 3385

Kingdom

Pseudomonadati

Phylum

Thermodesulfobacteriota

Class

Desulfobacteria

Order

Desulfobacterales

Family

Desulfobacteraceae

Genus

Desulfocicer

Description

Desulfocicer vacuolatum DSM 3385 is a sulfate-reducing bacterium characterized by a single replicon. This organism is notable for its metabolic capabilities, particularly in environments where sulfate serves as an electron acceptor, which is a critical process in biogeochemical cycles, especially in anaerobic conditions. The strain is cataloged under the accession FWXY00000000.1, indicating its genomic data is available for further research and analysis. This genetic information can provide insights into its metabolic pathways and functional characteristics, which are essential for understanding its role in sulfur cycling. The ecological significance of Desulfocicer vacuolatum lies in its contribution to the degradation of organic matter in sulfate-rich environments, such as marine sediments and other anaerobic habitats. By reducing sulfate to sulfide, it plays a pivotal role in nutrient cycling, impacting the overall health and dynamics of microbial communities. In summary, Desulfocicer vacuolatum DSM 3385, with its single replicon and documented genomic sequence, represents an important player in sulfate reduction processes. Its metabolic activities contribute to the ecological balance in anaerobic environments, highlighting the interconnection between microbial life and biogeochemical cycles.

Taxonomy

KingdomPseudomonadati
PhylumThermodesulfobacteriota
ClassDesulfobacteria
OrderDesulfobacterales
FamilyDesulfobacteraceae
GenusDesulfocicer
SpeciesDesulfocicer vacuolatum
StrainDSM 3385

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Desulfobacterium vacuolatum DSM 3385 genome assembly, contig:

Gene Summary

Adenine Count

1351755 bp

Thymine Count

1340293 bp

Guanine Count

1157870 bp

Cytosine Count

1185435 bp

Genome Length

5035799 bp

Protein-coding Genes

4101 genes

Non-Coding Genes

63 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
choline dehydrogenaseSAMN02746065_10946Not AvailableNegative2272169 - 227397466169.9
transcriptional regulator, tetr familySAMN02746065_10947Not AvailableNegative2274245 - 227484422239.0
aldehyde:ferredoxin oxidoreductaseSAMN02746065_10948Not AvailableNegative2274825 - 227724287385.5
amino acid/amide abc transporter atp-binding protein 1, haat familySAMN02746065_10949Not AvailablePositive2277566 - 227827325624.5
branched-chain amino acid transport system atp-binding proteinSAMN02746065_10950Not AvailablePositive2278270 - 227897425886.4
branched-chain amino acid transport system permease proteinSAMN02746065_10951Not AvailablePositive2278989 - 227986131771.9
amino acid/amide abc transporter membrane protein 2, haat familySAMN02746065_10952Not AvailablePositive2279869 - 228084034624.1
branched-chain amino acid transport system substrate-binding proteinSAMN02746065_10953Not AvailablePositive2281009 - 228223245444.5
choline/glycine/proline betaine transport proteinSAMN02746065_10954Not AvailableNegative2282590 - 228413456788.0
methylene-tetrahydrofolate reductase c terminalSAMN02746065_10955Not AvailableNegative2284622 - 228531125713.9

Displaying genes 1901 – 1910 of 4164 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.