Desulfocicer vacuolatum DSM 3385

Kingdom

Pseudomonadati

Phylum

Thermodesulfobacteriota

Class

Desulfobacteria

Order

Desulfobacterales

Family

Desulfobacteraceae

Genus

Desulfocicer

Description

Desulfocicer vacuolatum DSM 3385 is a sulfate-reducing bacterium characterized by a single replicon. This organism is notable for its metabolic capabilities, particularly in environments where sulfate serves as an electron acceptor, which is a critical process in biogeochemical cycles, especially in anaerobic conditions. The strain is cataloged under the accession FWXY00000000.1, indicating its genomic data is available for further research and analysis. This genetic information can provide insights into its metabolic pathways and functional characteristics, which are essential for understanding its role in sulfur cycling. The ecological significance of Desulfocicer vacuolatum lies in its contribution to the degradation of organic matter in sulfate-rich environments, such as marine sediments and other anaerobic habitats. By reducing sulfate to sulfide, it plays a pivotal role in nutrient cycling, impacting the overall health and dynamics of microbial communities. In summary, Desulfocicer vacuolatum DSM 3385, with its single replicon and documented genomic sequence, represents an important player in sulfate reduction processes. Its metabolic activities contribute to the ecological balance in anaerobic environments, highlighting the interconnection between microbial life and biogeochemical cycles.

Taxonomy

KingdomPseudomonadati
PhylumThermodesulfobacteriota
ClassDesulfobacteria
OrderDesulfobacterales
FamilyDesulfobacteraceae
GenusDesulfocicer
SpeciesDesulfocicer vacuolatum
StrainDSM 3385

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Desulfobacterium vacuolatum DSM 3385 genome assembly, contig:

Gene Summary

Adenine Count

1351755 bp

Thymine Count

1340293 bp

Guanine Count

1157870 bp

Cytosine Count

1185435 bp

Genome Length

5035799 bp

Protein-coding Genes

4101 genes

Non-Coding Genes

63 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
carbonic anhydrase or acetyltransferase, isoleucine patch superfamilySAMN02746065_106176Not AvailableNegative1809225 - 180975218675.5
predicted metal-binding proteinSAMN02746065_106178Not AvailablePositive1810250 - 181181258391.2
putative variant cofactor biosynthesis b12-binding domain/radical sam domain protein 1SAMN02746065_106179Not AvailablePositive1811938 - 181328149506.0
radical sam superfamily enzyme ygiq, upf0313 familySAMN02746065_106180Not AvailablePositive1813278 - 181476555467.8
nudix domain-containing proteinSAMN02746065_106181Not AvailablePositive1815107 - 181570322918.3
ribonucleoside-triphosphate reductase class iii catalytic subunitSAMN02746065_106182Not AvailablePositive1816141 - 181823479575.1
pyruvate formate lyase activating enzymeSAMN02746065_106183Not AvailablePositive1818249 - 181895325964.7
dna binding domain-containing protein, excisionase familySAMN02746065_106184Not AvailableNegative1819033 - 181998334958.3
hypothetical proteinSAMN02746065_106185Not AvailablePositive1820149 - 182100032086.5
hypothetical proteinSAMN02746065_106186Not AvailablePositive1821004 - 182188232128.3

Displaying genes 1511 – 1520 of 4164 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.