Desulfocicer vacuolatum DSM 3385

Kingdom

Pseudomonadati

Phylum

Thermodesulfobacteriota

Class

Desulfobacteria

Order

Desulfobacterales

Family

Desulfobacteraceae

Genus

Desulfocicer

Description

Desulfocicer vacuolatum DSM 3385 is a sulfate-reducing bacterium characterized by a single replicon. This organism is notable for its metabolic capabilities, particularly in environments where sulfate serves as an electron acceptor, which is a critical process in biogeochemical cycles, especially in anaerobic conditions. The strain is cataloged under the accession FWXY00000000.1, indicating its genomic data is available for further research and analysis. This genetic information can provide insights into its metabolic pathways and functional characteristics, which are essential for understanding its role in sulfur cycling. The ecological significance of Desulfocicer vacuolatum lies in its contribution to the degradation of organic matter in sulfate-rich environments, such as marine sediments and other anaerobic habitats. By reducing sulfate to sulfide, it plays a pivotal role in nutrient cycling, impacting the overall health and dynamics of microbial communities. In summary, Desulfocicer vacuolatum DSM 3385, with its single replicon and documented genomic sequence, represents an important player in sulfate reduction processes. Its metabolic activities contribute to the ecological balance in anaerobic environments, highlighting the interconnection between microbial life and biogeochemical cycles.

Taxonomy

KingdomPseudomonadati
PhylumThermodesulfobacteriota
ClassDesulfobacteria
OrderDesulfobacterales
FamilyDesulfobacteraceae
GenusDesulfocicer
SpeciesDesulfocicer vacuolatum
StrainDSM 3385

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Desulfobacterium vacuolatum DSM 3385 genome assembly, contig:

Gene Summary

Adenine Count

1351755 bp

Thymine Count

1340293 bp

Guanine Count

1157870 bp

Cytosine Count

1185435 bp

Genome Length

5035799 bp

Protein-coding Genes

4101 genes

Non-Coding Genes

63 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
l-serine ammonia-lyaseSAMN02746065_104209Not AvailableNegative1328706 - 132992943459.2
hypothetical proteinSAMN02746065_104210Not AvailablePositive1330197 - 13304278861.83
protein of unknown functionSAMN02746065_104211Not AvailablePositive1330460 - 133080712969.6
hypothetical proteinSAMN02746065_104212Not AvailablePositive1331224 - 133156112929.6
transposase dde domain group 1SAMN02746065_1051Not AvailablePositive1331562 - 133250937083.0
pas domain s-box-containing protein/diguanylate cyclase (ggdef) domain-containing proteinSAMN02746065_1052Not AvailablePositive1332801 - 1336145125709.0
abc-type glutathione transport system atpase component, contains duplicated atpase domainSAMN02746065_1053Not AvailablePositive1336553 - 133860475827.7
hypothetical proteinSAMN02746065_1054Not AvailablePositive1338604 - 133920921776.5
trna(ile2) 2-agmatinylcytidine synthetaseSAMN02746065_1055Not AvailableNegative1339226 - 133997827086.5
outer membrane cobalamin receptor proteinSAMN02746065_1056Not AvailableNegative1340188 - 134215272588.3

Displaying genes 1141 – 1150 of 4164 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.