Anaerocolumna xylanovorans DSM 12503

rodanaerobic

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Lachnospirales

Family

Lachnospiraceae

Genus

Anaerocolumna

Description

Anaerocolumna xylanovorans DSM 12503 is a Gram-positive, anaerobic bacterium characterized by its rod shape. This species is notable for its unique metabolic capabilities, particularly its ability to utilize xylan, a major component of plant hemicellulose, which suggests its potential role in the degradation of plant materials in various ecological contexts. The bacterium contains a single replicon, indicating a streamlined genomic structure that may contribute to its specialized metabolic functions. The accessions for this species are cataloged under FRFD00000000.1, providing a reference point for researchers interested in further genomic analysis and exploration of its metabolic pathways. Anaerocolumna xylanovorans is significant in the context of soil microbiology and the cycling of organic matter, as its ability to degrade xylan could facilitate the breakdown of lignocellulosic biomass. This process is important for nutrient recycling in anaerobic environments, such as wetlands and the digestive systems of herbivores. By participating in the decomposition of plant materials, Anaerocolumna xylanovorans may contribute to the overall health and sustainability of its ecological niche, underscoring the importance of anaerobic microorganisms in natural ecosystems.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderLachnospirales
FamilyLachnospiraceae
GenusAnaerocolumna
SpeciesAnaerocolumna xylanovorans
StrainDSM 12503

Profile

Physiology
Gram staining propertiesGram-positive
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsanaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Anaerocolumna xylanovorans DSM 12503 genome assembly, contig:

Gene Summary

Adenine Count

1613921 bp

Thymine Count

1627509 bp

Guanine Count

1079207 bp

Cytosine Count

1094664 bp

Genome Length

5420325 bp

Protein-coding Genes

4544 genes

Non-Coding Genes

181 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinSAMN02745217_04640Not AvailableNegative5298083 - 529894934263.8
rhs repeat-associated core domain-containing proteinSAMN02745217_04641Not AvailableNegative5298966 - 5302403126864.0
hypothetical proteinSAMN02745217_04642Not AvailableNegative5302724 - 530312214957.8
plasmid segregation actin-type atpase parmSAMN02745217_04643Not AvailableNegative5303122 - 530404234420.7
fibronectin type iii domain-containing proteinSAMN02745217_04644Not AvailableNegative5304259 - 530619671918.6
abc-type transport system, involved in lipoprotein release, permease componentSAMN02745217_04646Not AvailableNegative5307011 - 530834849325.6
hypothetical proteinSAMN02745217_04647Not AvailableNegative5308338 - 530863110287.4
hypothetical proteinSAMN02745217_04648Not AvailableNegative5308651 - 531113188109.8
putative abc transport system atp-binding proteinSAMN02745217_04649Not AvailableNegative5311156 - 531199231099.1
predicted purr-regulated permease permSAMN02745217_04650Not AvailableNegative5312236 - 531348346611.8

Displaying genes 4611 – 4620 of 4725 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.