Anaerocolumna xylanovorans DSM 12503

rodanaerobic

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Lachnospirales

Family

Lachnospiraceae

Genus

Anaerocolumna

Description

Anaerocolumna xylanovorans DSM 12503 is a Gram-positive, anaerobic bacterium characterized by its rod shape. This species is notable for its unique metabolic capabilities, particularly its ability to utilize xylan, a major component of plant hemicellulose, which suggests its potential role in the degradation of plant materials in various ecological contexts. The bacterium contains a single replicon, indicating a streamlined genomic structure that may contribute to its specialized metabolic functions. The accessions for this species are cataloged under FRFD00000000.1, providing a reference point for researchers interested in further genomic analysis and exploration of its metabolic pathways. Anaerocolumna xylanovorans is significant in the context of soil microbiology and the cycling of organic matter, as its ability to degrade xylan could facilitate the breakdown of lignocellulosic biomass. This process is important for nutrient recycling in anaerobic environments, such as wetlands and the digestive systems of herbivores. By participating in the decomposition of plant materials, Anaerocolumna xylanovorans may contribute to the overall health and sustainability of its ecological niche, underscoring the importance of anaerobic microorganisms in natural ecosystems.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderLachnospirales
FamilyLachnospiraceae
GenusAnaerocolumna
SpeciesAnaerocolumna xylanovorans
StrainDSM 12503

Profile

Physiology
Gram staining propertiesGram-positive
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsanaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Anaerocolumna xylanovorans DSM 12503 genome assembly, contig:

Gene Summary

Adenine Count

1613921 bp

Thymine Count

1627509 bp

Guanine Count

1079207 bp

Cytosine Count

1094664 bp

Genome Length

5420325 bp

Protein-coding Genes

4544 genes

Non-Coding Genes

181 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
dna-binding transcriptional regulator, lysr familySAMN02745217_03426Not AvailableNegative3879455 - 388036033801.1
arsenate reductase, glutaredoxin familySAMN02745217_03427Not AvailableNegative3880364 - 388070513496.2
hypothetical proteinSAMN02745217_03428Not AvailableNegative3880792 - 388106710218.1
hypothetical proteinSAMN02745217_03429Not AvailablePositive3881268 - 388247645429.8
cellulase (glycosyl hydrolase family 5)SAMN02745217_03430Not AvailableNegative3882595 - 388432864640.6
hypothetical proteinSAMN02745217_03431Not AvailablePositive3884691 - 388517918419.3
adenylosuccinate lyaseSAMN02745217_03432Not AvailableNegative3885348 - 388678154137.3
amidophosphoribosyltransferaseSAMN02745217_03433Not AvailableNegative3886958 - 388840052641.8
phosphoribosylaminoimidazole-succinocarboxamide synthaseSAMN02745217_03434Not AvailableNegative3888520 - 388922726918.5
helix-turn-helixSAMN02745217_03435Not AvailablePositive3889784 - 389023017340.9

Displaying genes 3411 – 3420 of 4725 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.