Anaerocolumna xylanovorans DSM 12503

rodanaerobic

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Lachnospirales

Family

Lachnospiraceae

Genus

Anaerocolumna

Description

Anaerocolumna xylanovorans DSM 12503 is a Gram-positive, anaerobic bacterium characterized by its rod shape. This species is notable for its unique metabolic capabilities, particularly its ability to utilize xylan, a major component of plant hemicellulose, which suggests its potential role in the degradation of plant materials in various ecological contexts. The bacterium contains a single replicon, indicating a streamlined genomic structure that may contribute to its specialized metabolic functions. The accessions for this species are cataloged under FRFD00000000.1, providing a reference point for researchers interested in further genomic analysis and exploration of its metabolic pathways. Anaerocolumna xylanovorans is significant in the context of soil microbiology and the cycling of organic matter, as its ability to degrade xylan could facilitate the breakdown of lignocellulosic biomass. This process is important for nutrient recycling in anaerobic environments, such as wetlands and the digestive systems of herbivores. By participating in the decomposition of plant materials, Anaerocolumna xylanovorans may contribute to the overall health and sustainability of its ecological niche, underscoring the importance of anaerobic microorganisms in natural ecosystems.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderLachnospirales
FamilyLachnospiraceae
GenusAnaerocolumna
SpeciesAnaerocolumna xylanovorans
StrainDSM 12503

Profile

Physiology
Gram staining propertiesGram-positive
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsanaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Anaerocolumna xylanovorans DSM 12503 genome assembly, contig:

Gene Summary

Adenine Count

1613921 bp

Thymine Count

1627509 bp

Guanine Count

1079207 bp

Cytosine Count

1094664 bp

Genome Length

5420325 bp

Protein-coding Genes

4544 genes

Non-Coding Genes

181 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
putative membrane protein, tigr04086 familySAMN02745217_02842Not AvailablePositive3221209 - 322158313566.7
six-cysteine peptide sciffSAMN02745217_02843Not AvailablePositive3221678 - 32218185016.03
uncharacterized proteinSAMN02745217_02844Not AvailablePositive3221965 - 322344055876.3
single-stranded-dna-specific exonucleaseSAMN02745217_02845Not AvailablePositive3223540 - 322530966266.4
transcriptional regulator, laci familySAMN02745217_02846Not AvailableNegative3225331 - 322632637266.5
putative aldouronate transport system permease proteinSAMN02745217_02847Not AvailablePositive3226796 - 322770734442.0
carbohydrate abc transporter membrane protein 2, cut1 family (tc 3.a.1.1.-)SAMN02745217_02848Not AvailablePositive3227888 - 322879033474.6
putative aldouronate transport system substrate-binding proteinSAMN02745217_02849Not AvailablePositive3228815 - 323045260966.7
beta-fructofuranosidaseSAMN02745217_02850Not AvailablePositive3230457 - 323207662049.8
sucrose-6-phosphate hydrolase sacc, gh32 familySAMN02745217_02851Not AvailablePositive3232060 - 323422582918.9

Displaying genes 2831 – 2840 of 4725 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.