Anaerocolumna xylanovorans DSM 12503

rodanaerobic

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Lachnospirales

Family

Lachnospiraceae

Genus

Anaerocolumna

Description

Anaerocolumna xylanovorans DSM 12503 is a Gram-positive, anaerobic bacterium characterized by its rod shape. This species is notable for its unique metabolic capabilities, particularly its ability to utilize xylan, a major component of plant hemicellulose, which suggests its potential role in the degradation of plant materials in various ecological contexts. The bacterium contains a single replicon, indicating a streamlined genomic structure that may contribute to its specialized metabolic functions. The accessions for this species are cataloged under FRFD00000000.1, providing a reference point for researchers interested in further genomic analysis and exploration of its metabolic pathways. Anaerocolumna xylanovorans is significant in the context of soil microbiology and the cycling of organic matter, as its ability to degrade xylan could facilitate the breakdown of lignocellulosic biomass. This process is important for nutrient recycling in anaerobic environments, such as wetlands and the digestive systems of herbivores. By participating in the decomposition of plant materials, Anaerocolumna xylanovorans may contribute to the overall health and sustainability of its ecological niche, underscoring the importance of anaerobic microorganisms in natural ecosystems.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderLachnospirales
FamilyLachnospiraceae
GenusAnaerocolumna
SpeciesAnaerocolumna xylanovorans
StrainDSM 12503

Profile

Physiology
Gram staining propertiesGram-positive
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsanaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Anaerocolumna xylanovorans DSM 12503 genome assembly, contig:

Gene Summary

Adenine Count

1613921 bp

Thymine Count

1627509 bp

Guanine Count

1079207 bp

Cytosine Count

1094664 bp

Genome Length

5420325 bp

Protein-coding Genes

4544 genes

Non-Coding Genes

181 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
haloacid dehalogenase superfamily, subfamily ia, variant 3 with third motif having dd or ed/haloacid dehalogenase superfamily, subfamily ia, variant 1 with third motif having dx(3-4)d or dx(3-4)eSAMN02745217_02427Not AvailableNegative2792285 - 279296225578.9
ribosomal small subunit pseudouridine synthase aSAMN02745217_02428Not AvailableNegative2793057 - 279377027209.0
nol1/nop2/sun family putative rna methylaseSAMN02745217_02429Not AvailableNegative2794009 - 279539752091.8
putative gtp pyrophosphokinaseSAMN02745217_02430Not AvailableNegative2795466 - 279626931463.1
peptidase family m23SAMN02745217_02431Not AvailableNegative2796461 - 279727931000.7
transcriptional attenuator, lytr familySAMN02745217_02432Not AvailableNegative2797650 - 279889746087.0
poly-gamma-glutamate synthesis protein (capsule biosynthesis protein)SAMN02745217_02433Not AvailableNegative2798929 - 280012844199.3
dipeptidase dSAMN02745217_02434Not AvailableNegative2800125 - 280158254248.9
hypothetical proteinSAMN02745217_02435Not AvailableNegative2801639 - 280300347830.3
act domain-containing proteinSAMN02745217_02436Not AvailableNegative2803055 - 280332710062.6

Displaying genes 2501 – 2510 of 4725 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.