Anaerocolumna xylanovorans DSM 12503

rodanaerobic

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Lachnospirales

Family

Lachnospiraceae

Genus

Anaerocolumna

Description

Anaerocolumna xylanovorans DSM 12503 is a Gram-positive, anaerobic bacterium characterized by its rod shape. This species is notable for its unique metabolic capabilities, particularly its ability to utilize xylan, a major component of plant hemicellulose, which suggests its potential role in the degradation of plant materials in various ecological contexts. The bacterium contains a single replicon, indicating a streamlined genomic structure that may contribute to its specialized metabolic functions. The accessions for this species are cataloged under FRFD00000000.1, providing a reference point for researchers interested in further genomic analysis and exploration of its metabolic pathways. Anaerocolumna xylanovorans is significant in the context of soil microbiology and the cycling of organic matter, as its ability to degrade xylan could facilitate the breakdown of lignocellulosic biomass. This process is important for nutrient recycling in anaerobic environments, such as wetlands and the digestive systems of herbivores. By participating in the decomposition of plant materials, Anaerocolumna xylanovorans may contribute to the overall health and sustainability of its ecological niche, underscoring the importance of anaerobic microorganisms in natural ecosystems.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderLachnospirales
FamilyLachnospiraceae
GenusAnaerocolumna
SpeciesAnaerocolumna xylanovorans
StrainDSM 12503

Profile

Physiology
Gram staining propertiesGram-positive
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsanaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Anaerocolumna xylanovorans DSM 12503 genome assembly, contig:

Gene Summary

Adenine Count

1613921 bp

Thymine Count

1627509 bp

Guanine Count

1079207 bp

Cytosine Count

1094664 bp

Genome Length

5420325 bp

Protein-coding Genes

4544 genes

Non-Coding Genes

181 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
mfs transporter, dha2 family, lincomycin resistance proteinSAMN02745217_02163Not AvailableNegative2493714 - 249518652532.9
acetyltransferase (gnat) family proteinSAMN02745217_02164Not AvailableNegative2495443 - 249597020093.9
wg containing repeat-containing proteinSAMN02745217_02165Not AvailableNegative2496052 - 249770460948.1
hypothetical proteinSAMN02745217_02166Not AvailableNegative2497983 - 249847719276.5
sam-dependent methyltransferase, mida familySAMN02745217_02167Not AvailableNegative2498618 - 250021661478.8
nadh-fmn oxidoreductase rutf, flavin reductase (dim6/ntab) familySAMN02745217_02168Not AvailableNegative2500461 - 250099720478.5
abc-2 type transport system permease proteinSAMN02745217_02169Not AvailableNegative2501122 - 250194029592.0
abc-2 type transport system atp-binding proteinSAMN02745217_02170Not AvailableNegative2501937 - 250288435761.4
signal transduction histidine kinaseSAMN02745217_02171Not AvailableNegative2502996 - 250405439549.9
dna-binding response regulator, ompr family, contains rec and winged-helix (whth) domainSAMN02745217_02172Not AvailableNegative2504041 - 250472126396.0

Displaying genes 2241 – 2250 of 4725 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.