Anaerocolumna xylanovorans DSM 12503

rodanaerobic

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Lachnospirales

Family

Lachnospiraceae

Genus

Anaerocolumna

Description

Anaerocolumna xylanovorans DSM 12503 is a Gram-positive, anaerobic bacterium characterized by its rod shape. This species is notable for its unique metabolic capabilities, particularly its ability to utilize xylan, a major component of plant hemicellulose, which suggests its potential role in the degradation of plant materials in various ecological contexts. The bacterium contains a single replicon, indicating a streamlined genomic structure that may contribute to its specialized metabolic functions. The accessions for this species are cataloged under FRFD00000000.1, providing a reference point for researchers interested in further genomic analysis and exploration of its metabolic pathways. Anaerocolumna xylanovorans is significant in the context of soil microbiology and the cycling of organic matter, as its ability to degrade xylan could facilitate the breakdown of lignocellulosic biomass. This process is important for nutrient recycling in anaerobic environments, such as wetlands and the digestive systems of herbivores. By participating in the decomposition of plant materials, Anaerocolumna xylanovorans may contribute to the overall health and sustainability of its ecological niche, underscoring the importance of anaerobic microorganisms in natural ecosystems.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderLachnospirales
FamilyLachnospiraceae
GenusAnaerocolumna
SpeciesAnaerocolumna xylanovorans
StrainDSM 12503

Profile

Physiology
Gram staining propertiesGram-positive
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsanaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Anaerocolumna xylanovorans DSM 12503 genome assembly, contig:

Gene Summary

Adenine Count

1613921 bp

Thymine Count

1627509 bp

Guanine Count

1079207 bp

Cytosine Count

1094664 bp

Genome Length

5420325 bp

Protein-coding Genes

4544 genes

Non-Coding Genes

181 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
chitinase family 18SAMN02745217_02152Not AvailablePositive2477572 - 247985179996.9
predicted dna-binding transcriptional regulator yafy, contains an hth and wyl domainsSAMN02745217_02153Not AvailableNegative2479942 - 248094338689.2
wyl domain-containing proteinSAMN02745217_02154Not AvailableNegative2480933 - 248216247750.4
pp_02124SAMN02745217_02155Not AvailablePositive2482351 - 2483583Not Available
spfh domain / band 7 family proteinSAMN02745217_02156Not AvailablePositive2484032 - 248512641608.5
peptidase family s41SAMN02745217_02157Not AvailablePositive2485156 - 248675460494.9
iron (metal) dependent repressor, dtxr familySAMN02745217_02158Not AvailableNegative2486760 - 248723018169.7
methyl-accepting chemotaxis sensory transducer with cache sensorSAMN02745217_02159Not AvailablePositive2487839 - 248995376834.2
hypothetical proteinSAMN02745217_02160Not AvailablePositive2490036 - 249086032249.5
valyl-trna synthetaseSAMN02745217_02162Not AvailablePositive2491266 - 249363591864.7

Displaying genes 2231 – 2240 of 4725 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.