Clostridium colicanis DSM 13634

anaerobic

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Eubacteriales

Family

Clostridiaceae

Genus

Clostridium

Description

Clostridium colicanis DSM 13634 is an anaerobic bacterium, meaning it thrives in environments devoid of oxygen. Its anaerobic nature suggests a role in environments that are rich in organic matter and low in oxygen, such as the intestines of mammals, where it may contribute to the microbiota. This species has a single replicon, indicating a relatively simple genomic structure. The genome sequence for C. colicanis is available under the accession number LTBB00000000.1, providing a valuable resource for researchers interested in its genetic characteristics and potential applications. Understanding the traits of C. colicanis can offer insights into its ecological role. As an anaerobic organism, it may participate in the degradation of complex organic materials and play a part in nutrient cycling within its habitat. Its presence in the gut ecosystem suggests that it could have implications for gut health and the overall balance of microbial communities. In summary, Clostridium colicanis DSM 13634 is an anaerobic bacterium with a single replicon, whose genome is documented under LTBB00000000.1. Its ecological role in anaerobic environments, particularly in mammalian intestines, may be significant in processes such as organic matter decomposition and maintaining gut microbial homeostasis.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderEubacteriales
FamilyClostridiaceae
GenusClostridium
SpeciesClostridium thermopalmarium
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsanaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Clostridium colicanis DSM 13634 CLCO_contig000083, whole genome

Gene Summary

Adenine Count

878390 bp

Thymine Count

924361 bp

Guanine Count

381932 bp

Cytosine Count

434817 bp

Genome Length

2619501 bp

Protein-coding Genes

2407 genes

Non-Coding Genes

129 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
excisionaseCLCOL_07890Not AvailableNegative811239 - 8114428110.85
helix-turn-helix domain proteinCLCOL_07900Not AvailableNegative811903 - 8121338948.08
rna polymerase sigma factorCLCOL_07910Not AvailableNegative812130 - 81255216461.6
anaerobic benzoate catabolism transcriptional regulatorCLCOL_07920Not AvailablePositive813057 - 81341013545.3
tetracycline resistance protein tetm from transposon tnfo1CLCOL_07930Not AvailableNegative813756 - 81567572810.0
conjugative transposon protein tcpcCLCOL_07940Not AvailableNegative815923 - 81685535816.8
putative endopeptidase p60 precursorCLCOL_07950Not AvailableNegative816852 - 81785336856.5
hypothetical proteinCLCOL_07960Not AvailableNegative817850 - 82002780584.2
aaa-like domain proteinCLCOL_07970Not AvailableNegative820030 - 82247793323.0
antirestriction protein ardaCLCOL_07980Not AvailableNegative822942 - 82343919126.0

Displaying genes 801 – 810 of 2536 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

5 records
Metabolite IDMetabolite nameStructureCAS number
BASm0002051D-fructoseC6H12O6Chemical structure of D-fructose57-48-7
Average180.1559Da
Monoisotopic180.0633881Da
BASm0014079FuranC4H4OChemical structure of Furan110-00-9
Average68.074Da
Monoisotopic68.02621475Da
BASm0014084GlycogenC24H42O21Chemical structure of Glycogen9005-79-2
Average666.5777Da
Monoisotopic666.221858406Da
BASm0014085AmylopectinC30H52O26Chemical structure of Amylopectin9037-22-3
Average828.7183Da
Monoisotopic828.274681836Da
BASm0014086Amylose(C12H20O11)nC2H6Chemical structure of Amylose9005-82-7Not available

Displaying 1–5 of 5 metabolites

Health Effects

No health effects information available for this bacterium.