Clostridium colicanis DSM 13634

anaerobic

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Eubacteriales

Family

Clostridiaceae

Genus

Clostridium

Description

Clostridium colicanis DSM 13634 is an anaerobic bacterium, meaning it thrives in environments devoid of oxygen. Its anaerobic nature suggests a role in environments that are rich in organic matter and low in oxygen, such as the intestines of mammals, where it may contribute to the microbiota. This species has a single replicon, indicating a relatively simple genomic structure. The genome sequence for C. colicanis is available under the accession number LTBB00000000.1, providing a valuable resource for researchers interested in its genetic characteristics and potential applications. Understanding the traits of C. colicanis can offer insights into its ecological role. As an anaerobic organism, it may participate in the degradation of complex organic materials and play a part in nutrient cycling within its habitat. Its presence in the gut ecosystem suggests that it could have implications for gut health and the overall balance of microbial communities. In summary, Clostridium colicanis DSM 13634 is an anaerobic bacterium with a single replicon, whose genome is documented under LTBB00000000.1. Its ecological role in anaerobic environments, particularly in mammalian intestines, may be significant in processes such as organic matter decomposition and maintaining gut microbial homeostasis.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderEubacteriales
FamilyClostridiaceae
GenusClostridium
SpeciesClostridium thermopalmarium
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsanaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Clostridium colicanis DSM 13634 CLCO_contig000083, whole genome

Gene Summary

Adenine Count

878390 bp

Thymine Count

924361 bp

Guanine Count

381932 bp

Cytosine Count

434817 bp

Genome Length

2619501 bp

Protein-coding Genes

2407 genes

Non-Coding Genes

129 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
gtp pyrophosphokinase yjbmCLCOL_12400Not AvailableNegative1283022 - 128381331039.8
hypothetical proteinCLCOL_12410Not AvailablePositive1283996 - 128477530502.3
3',5'-cyclic adenosine monophosphate phosphodiesterase cpdaCLCOL_12420Not AvailableNegative1284826 - 128552426943.0
flagellar biosynthetic protein flhbCLCOL_12430Not AvailableNegative1285521 - 128579910257.2
hypothetical proteinCLCOL_12440Not AvailableNegative1285816 - 128781077159.1
tyrosine--trna ligaseCLCOL_12450Not AvailableNegative1287976 - 128919646363.2
hypothetical proteinCLCOL_12460Not AvailableNegative1289607 - 129001715828.8
divergent aaa domain proteinCLCOL_12470Not AvailableNegative1290167 - 129133044474.3
putative diguanylate cyclase ycdtCLCOL_12480Not AvailableNegative1291398 - 129249242063.0
hypothetical proteinCLCOL_12490Not AvailableNegative1292587 - 129316220427.8

Displaying genes 1251 – 1260 of 2536 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

5 records
Metabolite IDMetabolite nameStructureCAS number
BASm0002051D-fructoseC6H12O6Chemical structure of D-fructose57-48-7
Average180.1559Da
Monoisotopic180.0633881Da
BASm0014079FuranC4H4OChemical structure of Furan110-00-9
Average68.074Da
Monoisotopic68.02621475Da
BASm0014084GlycogenC24H42O21Chemical structure of Glycogen9005-79-2
Average666.5777Da
Monoisotopic666.221858406Da
BASm0014085AmylopectinC30H52O26Chemical structure of Amylopectin9037-22-3
Average828.7183Da
Monoisotopic828.274681836Da
BASm0014086Amylose(C12H20O11)nC2H6Chemical structure of Amylose9005-82-7Not available

Displaying 1–5 of 5 metabolites

Health Effects

No health effects information available for this bacterium.