Paramaledivibacter caminithermalis DSM 15212

rodanaerobic

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Peptostreptococcales

Family

Caminicellaceae

Genus

Paramaledivibacter

Description

Paramaledivibacter caminithermalis DSM 15212 is a Gram-positive bacterium characterized by its anaerobic metabolic requirements and rod-shaped morphology. This organism is notable for possessing a single replicon, which is relevant for its genetic stability and replication processes. The strain has been assigned the accession number FRAG00000000.1, which serves as a reference for its genetic sequencing and related studies. As an anaerobic bacteria, Paramaledivibacter caminithermalis likely thrives in environments devoid of oxygen, which can include various sedimentary or deep-sea habitats where organic matter is present. The rod shape of this bacterium may contribute to its adaptability in such environments, potentially facilitating motility and nutrient uptake. From a biological and ecological perspective, the presence of Gram-positive anaerobes like Paramaledivibacter caminithermalis in specific ecosystems may play a crucial role in biogeochemical cycles, particularly in the degradation of organic materials and the recycling of nutrients. Their ability to thrive in low-oxygen conditions suggests that they could be important players in anaerobic digestion processes, contributing to the breakdown of complex organic compounds and influencing the overall microbial community structure in their native habitats.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderPeptostreptococcales
FamilyCaminicellaceae
GenusParamaledivibacter
SpeciesParamaledivibacter caminithermalis
StrainDSM 15212

Profile

Physiology
Gram staining propertiesGram-positive
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsanaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Clostridium caminithermale DSM 15212 genome assembly, contig:

Gene Summary

Adenine Count

1408149 bp

Thymine Count

1405101 bp

Guanine Count

621233 bp

Cytosine Count

618008 bp

Genome Length

4060624 bp

Protein-coding Genes

3765 genes

Non-Coding Genes

85 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
dipeptidase, putativeSAMN02745912_00304Not AvailablePositive311794 - 31318253247.3
transcriptional antiterminatorSAMN02745912_00305Not AvailablePositive313330 - 31495263418.1
pentose-5-phosphate-3-epimeraseSAMN02745912_00306Not AvailablePositive315031 - 31574726476.1
pts system, glucose subfamily, iia componentSAMN02745912_00307Not AvailablePositive316027 - 31650617446.4
tryptophanaseSAMN02745912_00308Not AvailablePositive316532 - 31791751907.2
transcriptional regulator containing pas, aaa-type atpase, and dna-binding fis domainsSAMN02745912_00309Not AvailablePositive318118 - 31985465510.6
diaminopropionate ammonia-lyaseSAMN02745912_00310Not AvailablePositive320235 - 32144644857.8
knotted carbamoyltransferase ygewSAMN02745912_00311Not AvailablePositive321469 - 32266545148.0
putative selenium metabolism hydrolaseSAMN02745912_00312Not AvailablePositive322681 - 32395247619.7
putative selenate reductaseSAMN02745912_00313Not AvailablePositive324045 - 32575465216.8

Displaying genes 361 – 370 of 3850 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

12 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0001717fumarateC4H2O4Chemical structure of fumarateNot available
Average114.0563Da
Monoisotopic113.9953086Da
BASm0001779orotateC5H3N2O4Chemical structure of orotateNot available
Average155.09Da
Monoisotopic155.0098302Da
BASm0001865diphosphateHO7P2Chemical structure of diphosphateNot available
Average174.95Da
Monoisotopic174.9213971Da
BASm0001988(R)-mevalonateC6H11O4Chemical structure of (R)-mevalonateNot available
Average147.1491Da
Monoisotopic147.0657338Da
BASm0002780orotidine 5'-phosphateC10H10N2O11PNot available2149-82-8
Average365.168Da
Monoisotopic365.003866888Da
BASm0003389NADP(+)C21H25N7O17P3Chemical structure of NADP(+)Not available
Average740.386Da
Monoisotopic740.053624107Da
BASm0003432di-trans,octa-cis-undecaprenyl diphosphateC55H89O7P2Chemical structure of di-trans,octa-cis-undecaprenyl diphosphateNot available
Average924.259Da
Monoisotopic923.609999942Da
BASm00034561-(5-phospho-beta-D-ribosyl)-5-[(5-phospho-beta-D-ribosylamino)methylideneamino]imidazole-4-carboxamideC15H21N5O15P2Chemical structure of 1-(5-phospho-beta-D-ribosyl)-5-[(5-phospho-beta-D-ribosylamino)methylideneamino]imidazole-4-carboxamideNot available
Average573.2993Da
Monoisotopic573.0509381Da
BASm00035255-[(5-phospho-1-deoxy-D-ribulos-1-ylimino)methylamino]-1-(5-phospho-beta-D-ribosyl)imidazole-4-carboxamideC15H21N5O15P2Chemical structure of 5-[(5-phospho-1-deoxy-D-ribulos-1-ylimino)methylamino]-1-(5-phospho-beta-D-ribosyl)imidazole-4-carboxamideNot available
Average573.303Da
Monoisotopic573.0531333Da

Displaying 1–10 of 12 metabolites

Health Effects

No health effects information available for this bacterium.