Brenneria nigrifluens DSM 30175 = ATCC 13028

rodaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Pectobacteriaceae

Genus

Brenneria

Description

Brenneria nigrifluens DSM 30175, also known as ATCC 13028, is a Gram-negative, aerobic bacterium characterized by its rod-shaped morphology. This species is notable for possessing a single replicon, which is a critical feature in its genetic structure. The genomic data for Brenneria nigrifluens can be accessed under the accession number QDKK00000000.1. As a Gram-negative organism, Brenneria nigrifluens possesses a characteristic cell wall structure that includes a thin peptidoglycan layer and an outer membrane containing lipopolysaccharides. This structure is significant in its interaction with the environment, influencing its susceptibility to antibiotics and its role in various ecological niches. The aerobic nature of Brenneria nigrifluens indicates that it requires oxygen for growth and metabolism, which can affect its distribution in different habitats. This requirement may also impact its ecological interactions, particularly in environments where oxygen levels fluctuate. In summary, Brenneria nigrifluens DSM 30175 is a rod-shaped, Gram-negative, aerobic bacterium with a single replicon. Its physiological traits highlight its adaptability to oxygen-rich environments, which may contribute to its ecological role and interactions within microbial communities. Further research on its ecological functions could provide insights into its contributions to nutrient cycling and its potential applications in biotechnology.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyPectobacteriaceae
GenusBrenneria
SpeciesBrenneria nigrifluens
StrainDSM 30175 = ATCC 13028

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Brenneria nigrifluens DSM 30175 = ATCC 13028


Gene Summary

Adenine Count

1067402 bp

Thymine Count

1066804 bp

Guanine Count

1348181 bp

Cytosine Count

1361743 bp

Genome Length

4844130 bp

Protein-coding Genes

4172 genes

Non-Coding Genes

323 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
lipoyl(octanoyl) transferase lipbDDT54_01900Not AvailableNegative393828 - 39450825323.5
duf493 domain-containing proteinDDT54_01905Not AvailableNegative394536 - 3947999843.98
serine-type d-ala-d-ala carboxypeptidaseDDT54_01910Not AvailableNegative394870 - 39608144291.1
endolytic peptidoglycan transglycosylase rlpaDDT54_01915Not AvailableNegative396285 - 39728935001.1
rod shape-determining protein rodaDDT54_01920Not AvailableNegative397303 - 39841540609.9
penicillin-binding protein 2DDT54_01925Not AvailableNegative398425 - 40032971677.5
23s rrna (pseudouridine(1915)-n(3))-methyltransferase rlmhDDT54_01930Not AvailableNegative400365 - 40083517628.3
ribosome silencing factor rsfsDDT54_01935Not AvailableNegative400837 - 40115411557.8
nicotinate-nucleotide adenylyltransferaseDDT54_01940Not AvailableNegative401332 - 40202125569.8
dna polymerase iii subunit deltaDDT54_01945Not AvailableNegative402011 - 40304538981.7

Displaying genes 631 – 640 of 4495 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.