Marinifilum flexuosum str. DSM 21950

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Marinilabiliales

Family

Marinifilaceae

Genus

Marinifilum

Description

Marinifilum flexuosum str. DSM 21950 is a notable species of bacteria characterized by its single replicon, indicative of a streamlined genomic organization. This organism has been cataloged with the accession number RAPQ00000000.1, which serves as a reference for genomic studies and further research. As a member of the Marinifilum genus, M. flexuosum is likely to inhabit marine environments, which aligns with the ecological niche often occupied by this group of bacteria. Such marine bacteria play crucial roles in nutrient cycling and organic matter decomposition, contributing to the overall health and stability of marine ecosystems. While specific metabolic pathways or ecological interactions of M. flexuosum are not detailed here, their presence in marine habitats suggests they may have significant impacts on the biogeochemical processes within these environments. In conclusion, Marinifilum flexuosum str. DSM 21950, with its single replicon and genomic reference, represents an important piece of the puzzle in understanding marine microbiomes and their functions in ecological contexts. Further research could elucidate its specific roles and interactions within marine ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderMarinilabiliales
FamilyMarinifilaceae
GenusMarinifilum
SpeciesMarinifilum flexuosum
StrainDSM 21950

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Marinifilum flexuosum strain DSM 21950 Ga0170439_109, whole genome

Gene Summary

Adenine Count

1658571 bp

Thymine Count

1656231 bp

Guanine Count

923280 bp

Cytosine Count

931390 bp

Genome Length

5169742 bp

Protein-coding Genes

4121 genes

Non-Coding Genes

144 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
putative autotransporter adhesin-like proteinBXY64_0049Not AvailablePositive49593 - 5031225631.9
glycosyl transferase family 1BXY64_0050Not AvailableNegative50417 - 54577159015.0
vanz like proteinBXY64_0051Not AvailablePositive54741 - 5516916410.8
badm/rrf2 family transcriptional regulatorBXY64_0052Not AvailableNegative55164 - 5560716359.2
ribose-5-phosphate isomeraseBXY64_0053Not AvailableNegative55740 - 5617715947.0
chey-like chemotaxis proteinBXY64_0054Not AvailablePositive56930 - 5731314503.6
holliday junction dna helicase subunit ruvbBXY64_0055Not AvailablePositive57415 - 5843737657.2
hypothetical proteinBXY64_0056Not AvailablePositive58450 - 5877912320.8
bacteriocin-like proteinBXY64_0058Not AvailableNegative59963 - 600553485.18
bacteriocin-like proteinBXY64_0059Not AvailableNegative60131 - 603438129.11

Displaying genes 151 – 160 of 4265 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

305 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002593alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,12alpha-dihydroxy-7-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm0000274aldehydo-D-galacturonateC6H9O7Chemical structure of aldehydo-D-galacturonateNot available
Average193.132Da
Monoisotopic193.0353762Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000399(S)-allantoinC4H6N4O3Chemical structure of (S)-allantoin97-59-6
Average158.1154Da
Monoisotopic158.0439901Da
BASm0000401(S)-2-succinylamino-6-oxoheptanedioateC11H12NO8Chemical structure of (S)-2-succinylamino-6-oxoheptanedioateNot available
Average286.218Da
Monoisotopic286.0579371Da

Displaying 1–10 of 305 metabolites

Health Effects

No health effects information available for this bacterium.