Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Simiduia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Simiduia |
| Species | Simiduia agarivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | Not Available |
Genome Summary
Simiduia agarivorans SA1 = DSM 21679
Accession NumberNC_018868.3
Gene Summary
Adenine Count
951810 bp
Thymine Count
947571 bp
Guanine Count
1201677 bp
Cytosine Count
1199168 bp
Genome Length
4300227 bp
Protein-coding Genes
3817 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| dsbe family thiol:disulfide interchange protein | M5M_RS00260 | Q9I3N1 | + | 58012 - 58542 | 19683.0 |
| lytic polysaccharide monooxygenase | M5M_RS00265 | Q02I11 | - | 58582 - 59925 | 48842.2 |
| hypothetical protein | M5M_RS20895 | Not Available | + | 60168 - 60293 | 4606.58 |
| sterol desaturase family protein | M5M_RS00275 | Not Available | - | 60366 - 61133 | 29109.4 |
| gamma-glutamylcyclotransferase | M5M_RS00280 | Not Available | - | 61262 - 61609 | 12655.0 |
| hypothetical protein | M5M_RS00285 | Not Available | - | 61689 - 62780 | 40868.1 |
| triacylglycerol lipase | M5M_RS00290 | Not Available | + | 63199 - 64170 | 35484.3 |
| nickel-type superoxide dismutase maturation protease | M5M_RS00295 | Not Available | + | 64370 - 64729 | 13184.1 |
| hypothetical protein | M5M_RS00300 | Not Available | - | 64726 - 66075 | 51305.6 |
| Trna-asp | Not Available | Not Available | + | 66914 - 66987 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.