Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Simiduia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Simiduia |
| Species | Simiduia agarivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | Not Available |
Genome Summary
Simiduia agarivorans SA1 = DSM 21679
Accession NumberNC_018868.3
Gene Summary
Adenine Count
951810 bp
Thymine Count
947571 bp
Guanine Count
1201677 bp
Cytosine Count
1199168 bp
Genome Length
4300227 bp
Protein-coding Genes
3817 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| phosphate abc transporter substrate-binding protein | M5M_RS00055 | Not Available | - | 15604 - 16038 | 15320.4 |
| hypothetical protein | M5M_RS00060 | Not Available | - | 16051 - 17265 | 43625.4 |
| glutamate--trna ligase | M5M_RS00065 | B3PD15 | + | 17578 - 19068 | 56292.9 |
| Trna-ala | Not Available | Not Available | + | 19210 - 19285 | Not Available |
| hypothetical protein | M5M_RS00075 | Not Available | - | 19671 - 19937 | 10077.6 |
| hypothetical protein | M5M_RS00080 | Not Available | - | 19934 - 20410 | 18201.9 |
| helix-turn-helix transcriptional regulator | M5M_RS00090 | Not Available | - | 20664 - 20981 | 11649.1 |
| permease | M5M_RS00095 | Not Available | + | 21100 - 22107 | 35313.2 |
| hypothetical protein | M5M_RS00100 | Not Available | - | 22409 - 22765 | 13463.1 |
| plp-dependent aminotransferase family protein | M5M_RS00105 | P39389 | - | 22861 - 24243 | 50874.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.