Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Simiduia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Simiduia |
| Species | Simiduia agarivorans |
| Strain | SA1 = DSM 21679 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
951810 bp
Thymine Count
947571 bp
Guanine Count
1201677 bp
Cytosine Count
1199168 bp
Genome Length
4300227 bp
Protein-coding Genes
3817 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| chemotaxis protein chew | M5M_RS00410 | P0A966 | Positive | 89526 - 90077 | 19673.7 |
| chemotaxis protein chew | M5M_RS00415 | Q52881 | Positive | 90077 - 90535 | 16385.2 |
| methyl-accepting chemotaxis protein | M5M_RS00420 | Q9I6V6 | Positive | 90662 - 92566 | 69275.4 |
| protein-glutamate o-methyltransferase cher | M5M_RS00425 | Q9KKL3 | Positive | 92587 - 93393 | 31227.0 |
| chemoreceptor glutamine deamidase ched | M5M_RS00430 | A1WZ13 | Positive | 93395 - 94033 | 23744.6 |
| chemotaxis response regulator protein-glutamate methylesterase | M5M_RS00435 | Q21G20 | Positive | 94046 - 95116 | 38455.3 |
| hypothetical protein | M5M_RS00440 | Not Available | Positive | 95121 - 95561 | 16587.6 |
| diguanylate cyclase domain-containing protein | M5M_RS00445 | Not Available | Negative | 95647 - 97101 | 56213.0 |
| bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase | M5M_RS00450 | Q9I2V5 | Negative | 97275 - 99899 | 94248.1 |
| duf1289 domain-containing protein | M5M_RS00455 | Not Available | Positive | 100269 - 100805 | 19985.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
