Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Simiduia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Simiduia |
| Species | Simiduia agarivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | Not Available |
Genome Summary
Simiduia agarivorans SA1 = DSM 21679
Accession NumberNC_018868.3
Gene Summary
Adenine Count
951810 bp
Thymine Count
947571 bp
Guanine Count
1201677 bp
Cytosine Count
1199168 bp
Genome Length
4300227 bp
Protein-coding Genes
3817 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| Trna-val | Not Available | Not Available | + | 67035 - 67110 | Not Available |
| cytochrome c-type biogenesis protein | M5M_RS00315 | Q9I3N0 | + | 67255 - 67734 | 18195.2 |
| c-type cytochrome biogenesis protein ccmi | M5M_RS00320 | Not Available | + | 67734 - 68960 | 43506.9 |
| chromosome segregation protein smc | M5M_RS00325 | Q81ZL2 | + | 69131 - 72640 | 132545.0 |
| cell division protein zipa | M5M_RS19215 | A1TZT8 | + | 72713 - 73693 | 35611.3 |
| nad-dependent dna ligase liga | M5M_RS00335 | B3PGQ8 | + | 73772 - 75796 | 73236.7 |
| transglycosylase slt domain-containing protein | M5M_RS00340 | Not Available | + | 75796 - 76410 | 23682.7 |
| hypothetical protein | M5M_RS00345 | Not Available | + | 76494 - 76922 | 16231.9 |
| had family hydrolase | M5M_RS00350 | Not Available | + | 76926 - 77777 | 30906.6 |
| hypothetical protein | M5M_RS00355 | Not Available | + | 77852 - 78091 | 8666.34 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.