Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Simiduia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Simiduia |
| Species | Simiduia agarivorans |
| Strain | SA1 = DSM 21679 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
951810 bp
Thymine Count
947571 bp
Guanine Count
1201677 bp
Cytosine Count
1199168 bp
Genome Length
4300227 bp
Protein-coding Genes
3817 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l20 | M5M_RS02760 | Q21KD7 | Positive | 612212 - 612568 | 13208.4 |
| phenylalanine--trna ligase subunit alpha | M5M_RS02765 | B3PL12 | Positive | 612705 - 613718 | 37623.1 |
| phenylalanine--trna ligase subunit beta | M5M_RS02770 | Q4ZUG2 | Positive | 613816 - 616200 | 85607.4 |
| integration host factor subunit alpha | M5M_RS02775 | Q48JR7 | Positive | 616228 - 616533 | 11564.7 |
| merr family transcriptional regulator | M5M_RS02780 | Not Available | Positive | 616517 - 616885 | 14127.0 |
| Trna-pro | Not Available | Not Available | Positive | 617031 - 617107 | Not Available |
| duf2788 domain-containing protein | M5M_RS02790 | Not Available | Positive | 617301 - 617501 | 7242.27 |
| amidohydrolase family protein | M5M_RS02795 | Not Available | Positive | 617568 - 618845 | 45132.9 |
| chitinase c-terminal domain-containing protein | M5M_RS02800 | P96156 | Negative | 618914 - 622372 | 121456.0 |
| glycosyl hydrolase family 18 protein | M5M_RS02805 | P07254 | Negative | 622440 - 624095 | 59082.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
