Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Simiduia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Simiduia |
| Species | Simiduia agarivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | Not Available |
Genome Summary
Simiduia agarivorans SA1 = DSM 21679
Accession NumberNC_018868.3
Gene Summary
Adenine Count
951810 bp
Thymine Count
947571 bp
Guanine Count
1201677 bp
Cytosine Count
1199168 bp
Genome Length
4300227 bp
Protein-coding Genes
3817 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| peptide-methionine (s)-s-oxide reductase msra | M5M_RS00210 | C1DGW5 | + | 49927 - 50550 | 22353.4 |
| sulfurtransferase | M5M_RS00215 | Q9I452 | - | 50547 - 51386 | 30587.8 |
| escu/yscu/hrcu family type iii secretion system export apparatus switch protein | M5M_RS00220 | Not Available | - | 51407 - 51697 | 10556.8 |
| flagellar hook-length control protein flik | M5M_RS00225 | Not Available | - | 51694 - 53121 | 50887.2 |
| cytochrome c biogenesis heme-transporting atpase ccma | M5M_RS00230 | Q5PKT6 | + | 53231 - 53863 | 22775.5 |
| heme exporter protein ccmb | M5M_RS00235 | Q9I3N6 | + | 53860 - 54543 | 23810.1 |
| heme abc transporter permease | M5M_RS00240 | Q9I3N5 | + | 54594 - 55334 | 27582.5 |
| heme exporter protein ccmd | M5M_RS00245 | Not Available | + | 55331 - 55537 | 7972.68 |
| cytochrome c maturation protein ccme | M5M_RS00250 | C5BHX7 | + | 55546 - 56025 | 17269.8 |
| heme lyase ccmf/nrfe family subunit | M5M_RS00255 | Q9I3N2 | + | 56015 - 58006 | 73385.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.