Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Simiduia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Simiduia |
| Species | Simiduia agarivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | Not Available |
Genome Summary
Simiduia agarivorans SA1 = DSM 21679
Accession NumberNC_018868.3
Gene Summary
Adenine Count
951810 bp
Thymine Count
947571 bp
Guanine Count
1201677 bp
Cytosine Count
1199168 bp
Genome Length
4300227 bp
Protein-coding Genes
3817 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| succinate--coa ligase subunit alpha | M5M_RS00160 | Q51567 | - | 36503 - 37375 | 29612.9 |
| adp-forming succinate--coa ligase subunit beta | M5M_RS00165 | Q21IW6 | - | 37375 - 38541 | 41472.0 |
| dihydrolipoyl dehydrogenase | M5M_RS00170 | P14218 | - | 38695 - 40149 | 51002.6 |
| 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase | M5M_RS00175 | Q9I3D2 | - | 40219 - 41436 | 42926.6 |
| 2-oxoglutarate dehydrogenase e1 component | M5M_RS00180 | P20707 | - | 41475 - 44309 | 106212.0 |
| succinate dehydrogenase iron-sulfur subunit | M5M_RS00185 | Q8ZQU2 | - | 44758 - 45462 | 26370.9 |
| succinate dehydrogenase flavoprotein subunit | M5M_RS00190 | P0AC43 | - | 45480 - 47249 | 63885.7 |
| succinate dehydrogenase, hydrophobic membrane anchor protein | M5M_RS00195 | Not Available | - | 47253 - 47621 | 13695.0 |
| succinate dehydrogenase, cytochrome b556 subunit | M5M_RS00200 | P63726 | - | 47615 - 47989 | 13424.8 |
| citrate synthase | M5M_RS00205 | P14165 | + | 48478 - 49764 | 47659.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.