Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Simiduia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Simiduia |
| Species | Simiduia agarivorans |
| Strain | SA1 = DSM 21679 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
951810 bp
Thymine Count
947571 bp
Guanine Count
1201677 bp
Cytosine Count
1199168 bp
Genome Length
4300227 bp
Protein-coding Genes
3817 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphohistidine phosphatase sixa | M5M_RS01655 | Not Available | Positive | 358470 - 358931 | 16282.5 |
| alpha/beta fold hydrolase | M5M_RS01660 | O18391 | Positive | 358918 - 359778 | 31486.9 |
| duf4892 domain-containing protein | M5M_RS01665 | Not Available | Positive | 359793 - 360686 | 32769.0 |
| gtp cyclohydrolase i fole | M5M_RS01670 | C5BL73 | Negative | 360703 - 361242 | 19895.4 |
| 50s ribosomal protein l3 n(5)-glutamine methyltransferase | M5M_RS01675 | Q9I347 | Positive | 361374 - 362279 | 32957.1 |
| chorismate synthase | M5M_RS01680 | B3PHF4 | Positive | 362342 - 363436 | 39231.8 |
| abc transporter transmembrane domain-containing protein | M5M_RS01685 | Not Available | Positive | 363433 - 364582 | 41410.8 |
| hypothetical protein | M5M_RS01690 | Not Available | Positive | 364696 - 365646 | 34945.2 |
| amidohydrolase | M5M_RS01695 | Q47679 | Positive | 365669 - 366448 | 29592.9 |
| fatty acid oxidation complex subunit alpha fadb | M5M_RS01700 | A4VKA3 | Positive | 366678 - 368828 | 76510.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
