Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Simiduia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Simiduia |
| Species | Simiduia agarivorans |
| Strain | SA1 = DSM 21679 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
951810 bp
Thymine Count
947571 bp
Guanine Count
1201677 bp
Cytosine Count
1199168 bp
Genome Length
4300227 bp
Protein-coding Genes
3817 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| m3 family metallopeptidase | M5M_RS12110 | P27237 | Negative | 2723995 - 2726037 | 75690.8 |
| gamma carbonic anhydrase family protein | M5M_RS12115 | P0A9W9 | Positive | 2726099 - 2726644 | 19441.3 |
| shikimate dehydrogenase | M5M_RS12120 | B3PGZ3 | Negative | 2726652 - 2727476 | 29298.0 |
| oxygen-dependent coproporphyrinogen oxidase | M5M_RS12125 | B8GTF9 | Negative | 2727473 - 2728378 | 34637.4 |
| l-threonylcarbamoyladenylate synthase | M5M_RS12130 | B3PGZ1 | Negative | 2728392 - 2728961 | 20014.0 |
| dna-processing protein dpra | M5M_RS12135 | P43862 | Negative | 2729030 - 2730139 | 39975.3 |
| lysm peptidoglycan-binding domain-containing protein | M5M_RS12140 | Not Available | Negative | 2730242 - 2731285 | 38203.1 |
| peptide deformylase | M5M_RS12145 | B3PGY7 | Positive | 2731558 - 2732061 | 19199.1 |
| methionyl-trna formyltransferase | M5M_RS12150 | A4VFH7 | Positive | 2732073 - 2733029 | 34417.5 |
| 16s rrna (cytosine(967)-c(5))-methyltransferase rsmb | M5M_RS12155 | Q9I7A9 | Positive | 2733022 - 2734311 | 46932.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
