Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Simiduia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Simiduia |
| Species | Simiduia agarivorans |
| Strain | SA1 = DSM 21679 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
951810 bp
Thymine Count
947571 bp
Guanine Count
1201677 bp
Cytosine Count
1199168 bp
Genome Length
4300227 bp
Protein-coding Genes
3817 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type ii secretion system protein gspc | M5M_RS11960 | P31699 | Negative | 2689867 - 2690751 | 31355.6 |
| twin-arginine translocation pathway signal protein | M5M_RS11965 | Not Available | Negative | 2691026 - 2692609 | 55655.0 |
| lamg domain-containing protein | M5M_RS11970 | Not Available | Negative | 2692629 - 2695139 | 88703.4 |
| hypothetical protein | M5M_RS11975 | Not Available | Negative | 2695151 - 2696368 | 44030.5 |
| hypothetical protein | M5M_RS11980 | Not Available | Positive | 2696767 - 2699487 | 99599.6 |
| sh3 domain-containing protein | M5M_RS11985 | Not Available | Positive | 2699686 - 2700339 | 24602.3 |
| outer membrane beta-barrel domain-containing protein | M5M_RS11990 | Not Available | Positive | 2700309 - 2700959 | 24457.4 |
| peroxiredoxin | M5M_RS11995 | Q5KXL9 | Positive | 2700974 - 2701462 | 18447.5 |
| duf4266 domain-containing protein | M5M_RS12000 | Not Available | Positive | 2701459 - 2701677 | 7687.2 |
| duf3570 domain-containing protein | M5M_RS12005 | Not Available | Positive | 2701664 - 2702839 | 44248.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
