Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Simiduia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Simiduia |
| Species | Simiduia agarivorans |
| Strain | SA1 = DSM 21679 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
951810 bp
Thymine Count
947571 bp
Guanine Count
1201677 bp
Cytosine Count
1199168 bp
Genome Length
4300227 bp
Protein-coding Genes
3817 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| vwa domain-containing protein | M5M_RS20500 | Not Available | Negative | 2647225 - 2651067 | 133480.0 |
| dna-binding hth domain-containing protein | M5M_RS11780 | Not Available | Positive | 2651615 - 2652730 | 41704.4 |
| hypothetical protein | M5M_RS19595 | Not Available | Negative | 2652972 - 2653436 | 16477.7 |
| winged helix-turn-helix domain-containing protein | M5M_RS19600 | Not Available | Negative | 2653568 - 2654404 | 30644.5 |
| tonb-dependent receptor | M5M_RS11795 | P0C2M9 | Negative | 2654538 - 2656928 | 86103.8 |
| bile acid:sodium symporter family protein | M5M_RS11800 | Q7XVB3 | Negative | 2656973 - 2657854 | 31920.1 |
| class ii aldolase/adducin family protein | M5M_RS11805 | Q9P5M9 | Negative | 2657858 - 2658658 | 29009.2 |
| lysr family transcriptional regulator | M5M_RS11810 | Not Available | Positive | 2658800 - 2659759 | 35736.3 |
| tonb-dependent receptor | M5M_RS11815 | Not Available | Positive | 2659988 - 2662372 | 88299.8 |
| hypothetical protein | M5M_RS11820 | Not Available | Negative | 2662493 - 2662801 | 11031.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
