Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Simiduia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Simiduia |
| Species | Simiduia agarivorans |
| Strain | SA1 = DSM 21679 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
951810 bp
Thymine Count
947571 bp
Guanine Count
1201677 bp
Cytosine Count
1199168 bp
Genome Length
4300227 bp
Protein-coding Genes
3817 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uroporphyrinogen-iii c-methyltransferase | M5M_RS11630 | Not Available | Negative | 2614136 - 2615287 | 43113.8 |
| uroporphyrinogen-iii synthase | M5M_RS11635 | Not Available | Negative | 2615343 - 2616113 | 27409.7 |
| hydroxymethylbilane synthase | M5M_RS11640 | A6VE37 | Negative | 2616110 - 2617039 | 33171.3 |
| lyttr family dna-binding domain-containing protein | M5M_RS11645 | P26275 | Negative | 2617094 - 2617828 | 27131.7 |
| sensor histidine kinase | M5M_RS11650 | Not Available | Negative | 2617828 - 2618850 | 37633.9 |
| argininosuccinate lyase | M5M_RS11655 | Q21EF4 | Positive | 2619029 - 2620423 | 51293.9 |
| pas domain-containing hybrid sensor histidine kinase/response regulator | M5M_RS19580 | Q5A599 | Positive | 2620516 - 2623992 | 130531.0 |
| response regulator | M5M_RS11665 | Not Available | Positive | 2624121 - 2626739 | 97488.6 |
| class i adenylate cyclase | M5M_RS19585 | Q59119 | Positive | 2626739 - 2629471 | 104727.0 |
| lps translocon maturation chaperone lptm | M5M_RS20775 | Not Available | Positive | 2629552 - 2629671 | 4158.19 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
