Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Simiduia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Simiduia |
| Species | Simiduia agarivorans |
| Strain | SA1 = DSM 21679 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
951810 bp
Thymine Count
947571 bp
Guanine Count
1201677 bp
Cytosine Count
1199168 bp
Genome Length
4300227 bp
Protein-coding Genes
3817 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1272 domain-containing protein | M5M_RS11440 | P42878 | Negative | 2583610 - 2583918 | 11134.4 |
| pyridoxamine 5'-phosphate oxidase family protein | M5M_RS11445 | Not Available | Negative | 2583958 - 2584515 | 20371.1 |
| smp-30/gluconolactonase/lre family protein | M5M_RS11450 | Q9A9Z1 | Negative | 2584541 - 2585425 | 32596.6 |
| ggdef domain-containing protein | M5M_RS19570 | Not Available | Negative | 2585522 - 2587300 | 65118.0 |
| thiol:disulfide interchange protein dsba/dsbl | M5M_RS11460 | Q02DM0 | Negative | 2587398 - 2588036 | 23442.0 |
| cytochrome c | M5M_RS11465 | P00106 | Negative | 2588262 - 2588912 | 22671.0 |
| ribosome biogenesis gtp-binding protein yiha/ysxc | M5M_RS11470 | Q21PP0 | Positive | 2589060 - 2589716 | 24261.4 |
| hemin uptake protein hemp | M5M_RS19890 | Not Available | Positive | 2589761 - 2589937 | 6416.81 |
| dna polymerase i | M5M_RS11475 | Not Available | Negative | 2590560 - 2593307 | 100518.0 |
| hypothetical protein | M5M_RS11480 | Not Available | Positive | 2593667 - 2593921 | 8972.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
