Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Simiduia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Simiduia |
| Species | Simiduia agarivorans |
| Strain | SA1 = DSM 21679 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
951810 bp
Thymine Count
947571 bp
Guanine Count
1201677 bp
Cytosine Count
1199168 bp
Genome Length
4300227 bp
Protein-coding Genes
3817 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tetratricopeptide repeat protein | M5M_RS11390 | Not Available | Positive | 2577174 - 2578013 | 30119.1 |
| spfh domain-containing protein | M5M_RS11395 | Not Available | Positive | 2578061 - 2578918 | 31358.8 |
| hypothetical protein | M5M_RS11400 | Not Available | Positive | 2578930 - 2579130 | 7550.1 |
| ph domain-containing protein | M5M_RS11405 | Not Available | Positive | 2579127 - 2579519 | 14195.5 |
| glutamine synthetase family protein | M5M_RS11410 | Not Available | Positive | 2579607 - 2580971 | 49436.6 |
| helix-turn-helix domain-containing protein | M5M_RS11415 | Not Available | Positive | 2581093 - 2581635 | 20444.6 |
| voc family protein | M5M_RS11420 | Not Available | Positive | 2581644 - 2582003 | 13223.4 |
| marr family winged helix-turn-helix transcriptional regulator | M5M_RS11425 | Not Available | Positive | 2582087 - 2582509 | 15787.3 |
| alpha/beta fold hydrolase | M5M_RS11430 | Not Available | Positive | 2582506 - 2583372 | 32323.9 |
| hypothetical protein | M5M_RS11435 | Not Available | Negative | 2583338 - 2583604 | 10278.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
