Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Simiduia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Simiduia |
| Species | Simiduia agarivorans |
| Strain | SA1 = DSM 21679 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
951810 bp
Thymine Count
947571 bp
Guanine Count
1201677 bp
Cytosine Count
1199168 bp
Genome Length
4300227 bp
Protein-coding Genes
3817 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hdod domain-containing protein | M5M_RS19565 | Not Available | Negative | 2566274 - 2567674 | 51157.6 |
| conjugal transfer protein traf | M5M_RS11345 | Not Available | Positive | 2567824 - 2569242 | 50046.1 |
| conjugal transfer protein traf | M5M_RS11350 | Not Available | Positive | 2569282 - 2570727 | 51654.9 |
| amidohydrolase | M5M_RS11355 | Q8GGD4 | Negative | 2570777 - 2572108 | 48127.0 |
| thioredoxin family protein | M5M_RS11360 | Not Available | Negative | 2572162 - 2572629 | 17551.1 |
| hypothetical protein | M5M_RS11365 | Not Available | Negative | 2572649 - 2573179 | 19068.7 |
| sdr family oxidoreductase | M5M_RS11370 | P25970 | Negative | 2573190 - 2573930 | 27018.7 |
| fumarylacetoacetate hydrolase family protein | M5M_RS11375 | P76004 | Negative | 2573952 - 2574611 | 23592.4 |
| phosphoglycerate dehydrogenase | M5M_RS11380 | Not Available | Positive | 2574819 - 2576045 | 43985.0 |
| eama family transporter rard | M5M_RS11385 | P27844 | Positive | 2576246 - 2577118 | 32403.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
