Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Simiduia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Simiduia |
| Species | Simiduia agarivorans |
| Strain | SA1 = DSM 21679 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
951810 bp
Thymine Count
947571 bp
Guanine Count
1201677 bp
Cytosine Count
1199168 bp
Genome Length
4300227 bp
Protein-coding Genes
3817 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcription termination factor rho | M5M_RS11235 | Q9HTV1 | Positive | 2537284 - 2538543 | 47219.1 |
| mechanosensitive ion channel family protein | M5M_RS11240 | O52401 | Positive | 2538620 - 2539447 | 30009.7 |
| 4-hydroxy-3-polyprenylbenzoate decarboxylase | M5M_RS11245 | B2VFE2 | Positive | 2539524 - 2541002 | 55353.5 |
| patatin-like phospholipase family protein | M5M_RS11250 | O34731 | Positive | 2540999 - 2543191 | 79919.0 |
| sodium:solute symporter family protein | M5M_RS11255 | Q9GZV3 | Negative | 2543155 - 2544603 | 52484.8 |
| tonb family protein | M5M_RS19555 | Not Available | Positive | 2544899 - 2546116 | 43809.6 |
| calcium/sodium antiporter | M5M_RS11265 | Not Available | Negative | 2546162 - 2547220 | 36794.7 |
| rhomboid family intramembrane serine protease | M5M_RS19560 | Not Available | Positive | 2547376 - 2548797 | 53257.4 |
| duf4013 domain-containing protein | M5M_RS11275 | Not Available | Positive | 2548794 - 2550293 | 55490.6 |
| duf4156 domain-containing protein | M5M_RS11280 | Not Available | Negative | 2550298 - 2550612 | 11015.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
