Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Simiduia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Simiduia |
| Species | Simiduia agarivorans |
| Strain | SA1 = DSM 21679 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
951810 bp
Thymine Count
947571 bp
Guanine Count
1201677 bp
Cytosine Count
1199168 bp
Genome Length
4300227 bp
Protein-coding Genes
3817 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| homoserine o-acetyltransferase | M5M_RS11185 | Q21EI0 | Positive | 2525101 - 2526267 | 42761.2 |
| methionine biosynthesis protein metw | M5M_RS11190 | Not Available | Positive | 2526270 - 2526857 | 22277.0 |
| duf4426 domain-containing protein | M5M_RS11195 | Not Available | Positive | 2526872 - 2527345 | 17470.9 |
| rdgb/ham1 family non-canonical purine ntp pyrophosphatase | M5M_RS11200 | Q88CT0 | Positive | 2527332 - 2527925 | 20596.5 |
| radical sam family heme chaperone hemw | M5M_RS11205 | P43899 | Positive | 2527925 - 2529091 | 42806.5 |
| response regulator | M5M_RS11210 | Not Available | Positive | 2529173 - 2531569 | 89162.1 |
| isochorismatase family protein | M5M_RS11215 | Not Available | Negative | 2531554 - 2532111 | 20616.7 |
| fad-dependent oxidoreductase | M5M_RS11220 | Q9PJI3 | Negative | 2532159 - 2534267 | 75705.0 |
| polyphosphate kinase 1 | M5M_RS11225 | P0DP44 | Positive | 2534398 - 2536458 | 76574.0 |
| thioredoxin trxa | M5M_RS11230 | Q9X2T1 | Positive | 2536610 - 2536936 | 11584.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
