Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Simiduia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Simiduia |
| Species | Simiduia agarivorans |
| Strain | SA1 = DSM 21679 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
951810 bp
Thymine Count
947571 bp
Guanine Count
1201677 bp
Cytosine Count
1199168 bp
Genome Length
4300227 bp
Protein-coding Genes
3817 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| energy transducer tonb | M5M_RS11135 | Not Available | Positive | 2515310 - 2516206 | 33108.0 |
| yqge/algh family protein | M5M_RS11140 | Q21EI7 | Positive | 2516267 - 2516851 | 20855.3 |
| holliday junction resolvase ruvx | M5M_RS11145 | Q21EI6 | Positive | 2516835 - 2517278 | 16316.1 |
| pilt/pilu family type 4a pilus atpase | M5M_RS11150 | G3XCX3 | Negative | 2517288 - 2518430 | 42303.2 |
| type iv pilus twitching motility protein pilt | M5M_RS11155 | P24559 | Negative | 2518443 - 2519477 | 38221.3 |
| yggs family pyridoxal phosphate-dependent enzyme | M5M_RS11160 | P24562 | Positive | 2519508 - 2520254 | 27191.4 |
| pyrroline-5-carboxylate reductase | M5M_RS11165 | P22008 | Positive | 2520310 - 2521128 | 28944.2 |
| yggt family protein | M5M_RS11170 | P25254 | Positive | 2521130 - 2521720 | 21042.3 |
| calcium/sodium antiporter | M5M_RS11175 | Q0ZAI3 | Negative | 2521733 - 2522698 | 32545.6 |
| dynamin family protein | M5M_RS11180 | Not Available | Positive | 2522924 - 2524918 | 75248.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
