Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Simiduia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Simiduia |
| Species | Simiduia agarivorans |
| Strain | SA1 = DSM 21679 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
951810 bp
Thymine Count
947571 bp
Guanine Count
1201677 bp
Cytosine Count
1199168 bp
Genome Length
4300227 bp
Protein-coding Genes
3817 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arac family transcriptional regulator | M5M_RS11040 | Not Available | Positive | 2490821 - 2491834 | 38266.0 |
| duf4136 domain-containing protein | M5M_RS11045 | Not Available | Negative | 2491840 - 2492403 | 20952.9 |
| tolc family outer membrane protein | M5M_RS11050 | Not Available | Positive | 2492595 - 2493968 | 49724.1 |
| lipid iv(a) 3-deoxy-d-manno-octulosonic acid transferase | M5M_RS11055 | P0AC77 | Negative | 2494056 - 2495321 | 46446.5 |
| fad-dependent oxidoreductase | M5M_RS11060 | Q9HUH4 | Positive | 2495415 - 2496611 | 43025.6 |
| aldo/keto reductase | M5M_RS11065 | P46336 | Positive | 2496623 - 2497417 | 28517.1 |
| n-acetyltransferase gcn5 | M5M_RS20350 | Not Available | Positive | 2497410 - 2497571 | 6012.02 |
| gnat family n-acetyltransferase | M5M_RS11070 | Not Available | Positive | 2497830 - 2498219 | 14954.0 |
| histone deacetylase | M5M_RS11075 | P28606 | Negative | 2498216 - 2499118 | 33027.7 |
| exea family protein | M5M_RS11080 | Not Available | Positive | 2499228 - 2500829 | 59317.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
