Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Simiduia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Simiduia |
| Species | Simiduia agarivorans |
| Strain | SA1 = DSM 21679 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
951810 bp
Thymine Count
947571 bp
Guanine Count
1201677 bp
Cytosine Count
1199168 bp
Genome Length
4300227 bp
Protein-coding Genes
3817 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3',5'-cyclic-amp phosphodiesterase | M5M_RS10990 | D4P095 | Negative | 2478344 - 2479156 | 30552.1 |
| duf1249 domain-containing protein | M5M_RS10995 | P0ADU9 | Negative | 2479182 - 2479643 | 17842.6 |
| nudix domain-containing protein | M5M_RS11000 | Not Available | Negative | 2479717 - 2480340 | 22971.4 |
| eal domain-containing protein | M5M_RS11005 | P77473 | Negative | 2480333 - 2481880 | 57582.5 |
| phosphomethylpyrimidine synthase thic | M5M_RS11010 | C5BTK7 | Negative | 2481915 - 2483819 | 70289.7 |
| bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | M5M_RS11015 | P56904 | Negative | 2483803 - 2484663 | 30078.2 |
| duf4136 domain-containing protein | M5M_RS11020 | Not Available | Negative | 2484881 - 2485462 | 21254.5 |
| duf3313 family protein | M5M_RS11025 | Not Available | Negative | 2485499 - 2486152 | 24530.7 |
| tonb-dependent receptor | M5M_RS19550 | Not Available | Negative | 2486277 - 2488898 | 93327.0 |
| gmc family oxidoreductase | M5M_RS11035 | Q9WWW2 | Negative | 2489001 - 2490635 | 59122.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
