Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Simiduia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Simiduia |
| Species | Simiduia agarivorans |
| Strain | SA1 = DSM 21679 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
951810 bp
Thymine Count
947571 bp
Guanine Count
1201677 bp
Cytosine Count
1199168 bp
Genome Length
4300227 bp
Protein-coding Genes
3817 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| potassium channel family protein | M5M_RS10695 | Not Available | Negative | 2414095 - 2414448 | 12667.8 |
| hypothetical protein | M5M_RS10700 | Not Available | Positive | 2414719 - 2415750 | 37167.2 |
| dna repair protein rada | M5M_RS10705 | P24554 | Negative | 2415822 - 2417189 | 48428.9 |
| prepilin-type n-terminal cleavage/methylation domain-containing protein | M5M_RS21000 | Not Available | Positive | 2417306 - 2417821 | 18148.8 |
| dnat-like ssdna-binding domain-containing protein | M5M_RS10715 | Not Available | Positive | 2417842 - 2418975 | 43256.8 |
| replication protein p | M5M_RS10720 | Not Available | Positive | 2418890 - 2419552 | 24421.8 |
| glucosaminidase domain-containing protein | M5M_RS10725 | Not Available | Positive | 2419610 - 2420560 | 36093.2 |
| cold-shock protein | M5M_RS10730 | P48859 | Negative | 2420615 - 2420827 | 7611.93 |
| polysaccharide deacetylase family protein | M5M_RS10735 | Not Available | Negative | 2420995 - 2422068 | 39088.4 |
| bifunctional isocitrate dehydrogenase kinase/phosphatase | M5M_RS10740 | B0KS44 | Positive | 2422155 - 2423891 | 67443.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
