Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Simiduia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Simiduia |
| Species | Simiduia agarivorans |
| Strain | SA1 = DSM 21679 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
951810 bp
Thymine Count
947571 bp
Guanine Count
1201677 bp
Cytosine Count
1199168 bp
Genome Length
4300227 bp
Protein-coding Genes
3817 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arac family transcriptional regulator | M5M_RS10495 | P28809 | Negative | 2353470 - 2354342 | 32807.4 |
| coa-acylating methylmalonate-semialdehyde dehydrogenase | M5M_RS10500 | P28810 | Positive | 2354501 - 2356018 | 55147.0 |
| acyl-coa dehydrogenase family protein | M5M_RS10505 | Q9D7B6 | Positive | 2356145 - 2357311 | 42259.4 |
| enoyl-coa hydratase | M5M_RS10510 | P52046 | Positive | 2357308 - 2358084 | 28504.3 |
| enoyl-coa hydratase/isomerase family protein | M5M_RS10515 | Q5ZJ60 | Positive | 2358285 - 2359394 | 40073.4 |
| 3-hydroxyisobutyrate dehydrogenase | M5M_RS10520 | P28811 | Positive | 2359391 - 2360281 | 30827.3 |
| mechanosensitive ion channel family protein | M5M_RS10525 | O66994 | Negative | 2360674 - 2362275 | 58722.8 |
| gnat family n-acetyltransferase | M5M_RS10530 | Not Available | Negative | 2362291 - 2362746 | 16457.8 |
| eal domain-containing protein | M5M_RS10535 | Not Available | Positive | 2362905 - 2366699 | 142832.0 |
| eal domain-containing protein | M5M_RS10540 | Not Available | Positive | 2366815 - 2369850 | 113294.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
