Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Simiduia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Simiduia |
| Species | Simiduia agarivorans |
| Strain | SA1 = DSM 21679 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
951810 bp
Thymine Count
947571 bp
Guanine Count
1201677 bp
Cytosine Count
1199168 bp
Genome Length
4300227 bp
Protein-coding Genes
3817 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| magnesium/cobalt transporter cora | M5M_RS10445 | O31543 | Positive | 2341297 - 2342265 | 37650.2 |
| mechanosensitive ion channel family protein | M5M_RS10450 | P77338 | Positive | 2342266 - 2343159 | 32636.5 |
| diguanylate cyclase domain-containing protein | M5M_RS10455 | Not Available | Negative | 2343144 - 2346119 | 108693.0 |
| magnesium transporter | M5M_RS10460 | O34442 | Negative | 2346199 - 2347560 | 49489.2 |
| energy-dependent translational throttle protein etta | M5M_RS10465 | P45127 | Negative | 2347636 - 2349297 | 61758.4 |
| ggdef domain-containing phosphodiesterase | M5M_RS10470 | Q9I310 | Positive | 2349426 - 2351048 | 59591.8 |
| abc transporter substrate-binding protein | M5M_RS10475 | Not Available | Positive | 2351035 - 2351814 | 28214.7 |
| zf-hc2 domain-containing protein | M5M_RS10480 | Not Available | Negative | 2351780 - 2352010 | 8863.69 |
| rna polymerase sigma factor | M5M_RS10485 | Not Available | Negative | 2352004 - 2352603 | 22829.3 |
| doxx family protein | M5M_RS10490 | Not Available | Positive | 2352732 - 2353331 | 21457.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
