Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Simiduia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Simiduia |
| Species | Simiduia agarivorans |
| Strain | SA1 = DSM 21679 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
951810 bp
Thymine Count
947571 bp
Guanine Count
1201677 bp
Cytosine Count
1199168 bp
Genome Length
4300227 bp
Protein-coding Genes
3817 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| polysaccharide lyase 6 family protein | M5M_RS10345 | Q06365 | Negative | 2321492 - 2323693 | 80203.2 |
| tonb-dependent receptor | M5M_RS10350 | Not Available | Negative | 2323808 - 2326840 | 110540.0 |
| duf808 domain-containing protein | M5M_RS10355 | P46125 | Negative | 2327203 - 2328129 | 32233.4 |
| vwa domain-containing protein | M5M_RS10360 | P76481 | Negative | 2328183 - 2330300 | 77015.2 |
| rna polymerase sigma factor | M5M_RS10365 | P44790 | Negative | 2330297 - 2330818 | 19659.3 |
| dna alkylation repair protein | M5M_RS10370 | Not Available | Negative | 2330880 - 2331578 | 26202.1 |
| voc family protein | M5M_RS10375 | Not Available | Negative | 2331571 - 2332029 | 16220.4 |
| sulfite exporter taue/safe family protein | M5M_RS10380 | Not Available | Positive | 2332124 - 2333044 | 32510.3 |
| hypothetical protein | M5M_RS10385 | Not Available | Negative | 2333073 - 2333378 | 11314.3 |
| helix-turn-helix domain-containing protein | M5M_RS10390 | Not Available | Positive | 2333520 - 2333969 | 17389.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
