Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Simiduia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Simiduia |
| Species | Simiduia agarivorans |
| Strain | SA1 = DSM 21679 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
951810 bp
Thymine Count
947571 bp
Guanine Count
1201677 bp
Cytosine Count
1199168 bp
Genome Length
4300227 bp
Protein-coding Genes
3817 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| polysaccharide lyase family 7 protein | M5M_RS10300 | Not Available | Positive | 2306110 - 2307498 | 50685.3 |
| hypothetical protein | M5M_RS20345 | Not Available | Negative | 2307610 - 2307765 | 5521.88 |
| chondroitinase-b domain-containing protein | M5M_RS10305 | Not Available | Negative | 2307878 - 2310868 | 100218.0 |
| polysaccharide lyase family 7 protein | M5M_RS10310 | Q59478 | Negative | 2310948 - 2312294 | 49197.3 |
| polysaccharide lyase family 7 protein | M5M_RS19535 | Not Available | Negative | 2312802 - 2314622 | 64616.8 |
| fadr/gntr family transcriptional regulator | M5M_RS10320 | P39161 | Positive | 2314909 - 2315664 | 27816.2 |
| sugar kinase | M5M_RS10325 | Not Available | Negative | 2316101 - 2317057 | 34886.7 |
| sdr family nad(p)-dependent oxidoreductase | M5M_RS10330 | F9XMW6 | Negative | 2317068 - 2317820 | 25883.0 |
| mfs transporter | M5M_RS10335 | P0AA79 | Negative | 2317975 - 2319270 | 46949.0 |
| alginate lyase family protein | M5M_RS10340 | Q21FJ0 | Negative | 2319309 - 2321495 | 80353.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
