Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Simiduia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Simiduia |
| Species | Simiduia agarivorans |
| Strain | SA1 = DSM 21679 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
951810 bp
Thymine Count
947571 bp
Guanine Count
1201677 bp
Cytosine Count
1199168 bp
Genome Length
4300227 bp
Protein-coding Genes
3817 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trap transporter small permease | M5M_RS10250 | Not Available | Positive | 2298468 - 2298956 | 17745.2 |
| trap transporter large permease | M5M_RS10255 | P40800 | Positive | 2298968 - 2300266 | 45421.1 |
| rhamnogalacturonan acetylesterase | M5M_RS10260 | O31523 | Positive | 2300266 - 2301069 | 30283.0 |
| yhyh protein | M5M_RS10265 | Not Available | Positive | 2301157 - 2301981 | 29443.6 |
| toxin-antitoxin system ywqk family antitoxin | M5M_RS10270 | Not Available | Positive | 2301965 - 2302561 | 23024.2 |
| sco family protein | M5M_RS10275 | Not Available | Positive | 2302527 - 2303171 | 24187.6 |
| response regulator | M5M_RS10280 | P69229 | Negative | 2303138 - 2303827 | 25938.7 |
| atp-binding protein | M5M_RS10285 | P30847 | Negative | 2303817 - 2305232 | 51418.0 |
| hypothetical protein | M5M_RS10290 | Not Available | Positive | 2305358 - 2305657 | 10678.7 |
| hypothetical protein | M5M_RS20495 | Not Available | Negative | 2305820 - 2306119 | 9696.58 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
