Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Simiduia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Simiduia |
| Species | Simiduia agarivorans |
| Strain | SA1 = DSM 21679 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
951810 bp
Thymine Count
947571 bp
Guanine Count
1201677 bp
Cytosine Count
1199168 bp
Genome Length
4300227 bp
Protein-coding Genes
3817 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sugar kinase | M5M_RS10200 | E0J5J4 | Positive | 2284215 - 2285144 | 33799.3 |
| ygjv family protein | M5M_RS10205 | Not Available | Positive | 2285141 - 2285674 | 19249.3 |
| gluconate 5-dehydrogenase | M5M_RS10210 | T2KLZ8 | Negative | 2285961 - 2286749 | 27463.1 |
| 5-dehydro-4-deoxy-d-glucuronate isomerase | M5M_RS10215 | Q8A2S4 | Negative | 2286742 - 2287608 | 31872.9 |
| duf4861 family protein | M5M_RS10220 | P0A3U6 | Negative | 2287627 - 2290047 | 88501.6 |
| tonb-dependent receptor | M5M_RS10225 | Not Available | Negative | 2290126 - 2292792 | 97842.1 |
| glycoside hydrolase family 28 protein | M5M_RS10230 | P27644 | Negative | 2293147 - 2294547 | 51286.9 |
| uxaa family hydrolase | M5M_RS10235 | P42240 | Positive | 2294835 - 2296352 | 53636.7 |
| pectinesterase family protein | M5M_RS10240 | Not Available | Negative | 2296366 - 2297346 | 36758.1 |
| trap transporter substrate-binding protein | M5M_RS10245 | P43020 | Positive | 2297486 - 2298457 | 35579.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
