Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Simiduia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Simiduia |
| Species | Simiduia agarivorans |
| Strain | SA1 = DSM 21679 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
951810 bp
Thymine Count
947571 bp
Guanine Count
1201677 bp
Cytosine Count
1199168 bp
Genome Length
4300227 bp
Protein-coding Genes
3817 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| energy-coupling factor abc transporter permease | M5M_RS10150 | Not Available | Positive | 2265094 - 2265768 | 24931.4 |
| tonb-dependent receptor | M5M_RS10155 | Not Available | Negative | 2265831 - 2268830 | 110709.0 |
| fibronectin type iii domain-containing protein | M5M_RS10160 | Not Available | Negative | 2268889 - 2271405 | 86371.7 |
| pectate lyase | M5M_RS10165 | Not Available | Negative | 2271516 - 2272694 | 43514.7 |
| alpha/beta hydrolase | M5M_RS10170 | Q50681 | Negative | 2272697 - 2273674 | 34899.7 |
| polysaccharide lyase family 1 protein | M5M_RS10175 | Q65DC2 | Negative | 2273655 - 2275400 | 60815.4 |
| carbohydrate-binding protein | M5M_RS20995 | Not Available | Positive | 2275959 - 2279600 | 127814.0 |
| fadr/gntr family transcriptional regulator | M5M_RS10185 | Q9X9E0 | Positive | 2279877 - 2280638 | 27512.7 |
| mannitol dehydrogenase family protein | M5M_RS10190 | P33029 | Negative | 2280963 - 2282441 | 53829.1 |
| glucuronate isomerase | M5M_RS10195 | Not Available | Negative | 2282453 - 2283868 | 53054.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
