Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Simiduia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Simiduia |
| Species | Simiduia agarivorans |
| Strain | SA1 = DSM 21679 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
951810 bp
Thymine Count
947571 bp
Guanine Count
1201677 bp
Cytosine Count
1199168 bp
Genome Length
4300227 bp
Protein-coding Genes
3817 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1304 domain-containing protein | M5M_RS10100 | Not Available | Negative | 2254614 - 2254988 | 13327.1 |
| replicative dna helicase | M5M_RS10105 | Q8FB22 | Negative | 2255290 - 2256753 | 53704.8 |
| 50s ribosomal protein l9 | M5M_RS10110 | B3PCS0 | Negative | 2256893 - 2257339 | 15382.6 |
| hypothetical protein | M5M_RS10115 | Not Available | Negative | 2257373 - 2258230 | 29838.5 |
| 30s ribosomal protein s18 | M5M_RS10120 | Q21LV9 | Negative | 2258270 - 2258497 | 8711.63 |
| 30s ribosomal protein s6 | M5M_RS10125 | Q21LW0 | Negative | 2258511 - 2258945 | 16689.2 |
| 23s rrna (guanosine(2251)-2'-o)-methyltransferase rlmb | M5M_RS10130 | Q8EAG8 | Negative | 2259574 - 2260323 | 26702.7 |
| ribonuclease r | M5M_RS10135 | Q9KNY1 | Negative | 2260422 - 2262926 | 93206.1 |
| Trna-leu | Not Available | Not Available | Positive | 2263116 - 2263202 | Not Available |
| sensor domain-containing diguanylate cyclase | M5M_RS10145 | A0A0H2ZJS2 | Positive | 2263644 - 2265038 | 52021.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
