Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Simiduia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Simiduia |
| Species | Simiduia agarivorans |
| Strain | SA1 = DSM 21679 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
951810 bp
Thymine Count
947571 bp
Guanine Count
1201677 bp
Cytosine Count
1199168 bp
Genome Length
4300227 bp
Protein-coding Genes
3817 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ammonium transporter | M5M_RS10055 | Q58739 | Positive | 2243114 - 2244325 | 42149.7 |
| phoh family protein | M5M_RS10060 | P46343 | Negative | 2244423 - 2245217 | 29424.9 |
| tonb-dependent receptor | M5M_RS10065 | P38370 | Negative | 2245800 - 2248775 | 108503.0 |
| response regulator | M5M_RS10070 | P0DOA0 | Positive | 2249102 - 2250655 | 58058.6 |
| c-type cytochrome | M5M_RS10075 | Q47945 | Positive | 2250719 - 2251285 | 20173.4 |
| cpbp family intramembrane glutamic endopeptidase | M5M_RS10080 | Not Available | Positive | 2251320 - 2252138 | 29691.3 |
| aspartate 1-decarboxylase | M5M_RS10085 | A6VUR3 | Negative | 2252157 - 2252537 | 13905.6 |
| pantoate--beta-alanine ligase | M5M_RS10090 | B3PCR5 | Negative | 2252545 - 2253396 | 31471.7 |
| hypothetical protein | M5M_RS20990 | Not Available | Negative | 2253853 - 2253975 | 4757.75 |
| rep-associated tyrosine transposase | M5M_RS10095 | Q47152 | Negative | 2253972 - 2254472 | 19679.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
